Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MIR662-201ENST00000384847 95 ntBASIC15.53■□□□□ 0.08
CDC42P60953 STARP1-201ENST00000397973 869 ntBASIC15.53■□□□□ 0.08
CDC42P60953 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDC42P60953 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC42P60953 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC42P60953 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 LINC00554-201ENST00000564841 3011 ntBASIC15.53■□□□□ 0.08
CDC42P60953 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC42P60953 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDC42P60953 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDC42P60953 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC42P60953 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC42P60953 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDC42P60953 LINC01568-207ENST00000641790 1380 ntBASIC15.52■□□□□ 0.08
CDC42P60953 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDC42P60953 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.52■□□□□ 0.08
CDC42P60953 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.52■□□□□ 0.08
CDC42P60953 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDC42P60953 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDC42P60953 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC42P60953 SPDYE15P-201ENST00000424157 909 ntBASIC15.52■□□□□ 0.08
CDC42P60953 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.52■□□□□ 0.08
CDC42P60953 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.52■□□□□ 0.08
CDC42P60953 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC42P60953 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CDC42P60953 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.52■□□□□ 0.08
CDC42P60953 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.52■□□□□ 0.08
CDC42P60953 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDC42P60953 ME2P1-201ENST00000426028 1970 ntBASIC15.52■□□□□ 0.07
CDC42P60953 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDC42P60953 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDC42P60953 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.52■□□□□ 0.07
CDC42P60953 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.52■□□□□ 0.07
CDC42P60953 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CDC42P60953 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.52■□□□□ 0.07
CDC42P60953 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.52■□□□□ 0.07
CDC42P60953 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDC42P60953 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDC42P60953 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDC42P60953 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 KRT8P10-201ENST00000450021 1447 ntBASIC15.51■□□□□ 0.07
CDC42P60953 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC42P60953 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDC42P60953 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CDC42P60953 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC42P60953 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDC42P60953 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 AC009336.1-201ENST00000608941 1553 ntBASIC15.51■□□□□ 0.07
CDC42P60953 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 HLA-J-202ENST00000469281 1241 ntBASIC15.51■□□□□ 0.07
CDC42P60953 STK19B-204ENST00000512515 211 ntBASIC15.51■□□□□ 0.07
CDC42P60953 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC42P60953 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 AC005332.3-201ENST00000589904 676 ntBASIC15.51■□□□□ 0.07
CDC42P60953 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC42P60953 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC42P60953 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC42P60953 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms