Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.83■□□□□ 0.77
RHBDL3P58872 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 MIR661-201ENST00000384842 89 ntBASIC19.83■□□□□ 0.77
RHBDL3P58872 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.83■□□□□ 0.77
RHBDL3P58872 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.83■□□□□ 0.77
RHBDL3P58872 AC097493.3-201ENST00000509725 367 ntBASIC19.83■□□□□ 0.77
RHBDL3P58872 AL158211.3-201ENST00000607385 239 ntBASIC19.83■□□□□ 0.77
RHBDL3P58872 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.83■□□□□ 0.77
RHBDL3P58872 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDL3P58872 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDL3P58872 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.83■□□□□ 0.76
RHBDL3P58872 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDL3P58872 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDL3P58872 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.83■□□□□ 0.76
RHBDL3P58872 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDL3P58872 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RHBDL3P58872 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RHBDL3P58872 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RHBDL3P58872 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.82■□□□□ 0.76
RHBDL3P58872 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.82■□□□□ 0.76
RHBDL3P58872 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDL3P58872 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDL3P58872 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RHBDL3P58872 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.82■□□□□ 0.76
RHBDL3P58872 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDL3P58872 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.82■□□□□ 0.76
RHBDL3P58872 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.82■□□□□ 0.76
RHBDL3P58872 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDL3P58872 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDL3P58872 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDL3P58872 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.81■□□□□ 0.76
RHBDL3P58872 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 AL645728.1-201ENST00000366221 2101 ntBASIC19.81■□□□□ 0.76
RHBDL3P58872 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDL3P58872 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RHBDL3P58872 AC073439.1-201ENST00000624121 1774 ntBASIC19.81■□□□□ 0.76
RHBDL3P58872 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RHBDL3P58872 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RHBDL3P58872 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.81■□□□□ 0.76
RHBDL3P58872 BASP1P1-201ENST00000430708 665 ntBASIC19.81■□□□□ 0.76
RHBDL3P58872 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.81■□□□□ 0.76
RHBDL3P58872 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.81■□□□□ 0.76
RHBDL3P58872 PRYP6-201ENST00000514804 343 ntBASIC19.81■□□□□ 0.76
RHBDL3P58872 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.81■□□□□ 0.76
RHBDL3P58872 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.81■□□□□ 0.76
RHBDL3P58872 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDL3P58872 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 AC060834.1-201ENST00000443027 2032 ntBASIC19.81■□□□□ 0.76
RHBDL3P58872 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDL3P58872 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDL3P58872 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.81■□□□□ 0.76
RHBDL3P58872 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.8■□□□□ 0.76
RHBDL3P58872 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.8■□□□□ 0.76
RHBDL3P58872 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.8■□□□□ 0.76
RHBDL3P58872 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.8■□□□□ 0.76
RHBDL3P58872 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RHBDL3P58872 INGX-202ENST00000489074 768 ntBASIC19.8■□□□□ 0.76
RHBDL3P58872 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.8■□□□□ 0.76
RHBDL3P58872 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 AC018529.1-201ENST00000613063 361 ntBASIC19.8■□□□□ 0.76
RHBDL3P58872 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RHBDL3P58872 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms