Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC25A1P1-201ENST00000528351 927 ntBASIC15.57■□□□□ 0.08
CLDN20P56880 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 AL356488.2-201ENST00000602755 427 ntBASIC15.57■□□□□ 0.08
CLDN20P56880 AL139424.1-201ENST00000607572 797 ntBASIC15.57■□□□□ 0.08
CLDN20P56880 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN20P56880 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN20P56880 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLDN20P56880 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN20P56880 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
CLDN20P56880 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN20P56880 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLDN20P56880 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN20P56880 AL022342.1-201ENST00000400363 863 ntBASIC15.56■□□□□ 0.08
CLDN20P56880 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN20P56880 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN20P56880 IGHV3-22-201ENST00000520721 359 ntBASIC15.56■□□□□ 0.08
CLDN20P56880 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN20P56880 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN20P56880 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.56■□□□□ 0.08
CLDN20P56880 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CLDN20P56880 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDN20P56880 AL353135.1-201ENST00000606729 504 ntBASIC15.56■□□□□ 0.08
CLDN20P56880 AC117500.6-201ENST00000624871 588 ntBASIC15.56■□□□□ 0.08
CLDN20P56880 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CLDN20P56880 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN20P56880 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN20P56880 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN20P56880 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN20P56880 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN20P56880 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CLDN20P56880 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN20P56880 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLDN20P56880 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN20P56880 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN20P56880 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN20P56880 ACTG1P4-201ENST00000425123 1122 ntBASIC15.55■□□□□ 0.08
CLDN20P56880 AC136632.2-201ENST00000512891 861 ntBASIC15.55■□□□□ 0.08
CLDN20P56880 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN20P56880 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 MIR1199-201ENST00000621445 119 ntBASIC15.55■□□□□ 0.08
CLDN20P56880 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN20P56880 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN20P56880 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN20P56880 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN20P56880 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN20P56880 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN20P56880 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CLDN20P56880 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN20P56880 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN20P56880 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN20P56880 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CLDN20P56880 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 PCDHB17P-201ENST00000539533 2393 ntBASIC15.54■□□□□ 0.08
CLDN20P56880 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 AL603756.1-201ENST00000606511 2163 ntBASIC15.54■□□□□ 0.08
CLDN20P56880 LINC00554-201ENST00000564841 3011 ntBASIC15.54■□□□□ 0.08
CLDN20P56880 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN20P56880 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN20P56880 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN20P56880 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms