Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 AL671710.1-201ENST00000610245 2349 ntBASIC18.46■□□□□ 0.55
NCKAP1LP55160 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 MCCD1P2-201ENST00000423228 335 ntBASIC18.46■□□□□ 0.55
NCKAP1LP55160 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.46■□□□□ 0.55
NCKAP1LP55160 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCKAP1LP55160 PCDHA12-202ENST00000613593 2588 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 PRORSD1P-202ENST00000563365 2154 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 RNU1-129P-201ENST00000384064 167 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 AGGF1P2-201ENST00000426656 2106 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 AC140658.5-201ENST00000438532 169 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 MIR3909-201ENST00000579518 119 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 U1.21-201ENST00000580816 167 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 AC068137.2-201ENST00000605408 478 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 AC092919.2-201ENST00000623631 1645 ntBASIC18.45■□□□□ 0.54
NCKAP1LP55160 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NCKAP1LP55160 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCKAP1LP55160 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.44■□□□□ 0.54
NCKAP1LP55160 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 KRT8P39-201ENST00000396270 1433 ntBASIC18.44■□□□□ 0.54
NCKAP1LP55160 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NCKAP1LP55160 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCKAP1LP55160 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms