Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC4P55056 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
APOC4P55056 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 AC140658.5-201ENST00000438532 169 ntBASIC12.38□□□□□ -0.43
APOC4P55056 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 DNAJB3-202ENST00000449667 1266 ntBASIC12.38□□□□□ -0.43
APOC4P55056 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC4P55056 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC4P55056 AC124947.2-201ENST00000547118 1133 ntBASIC12.38□□□□□ -0.43
APOC4P55056 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
APOC4P55056 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 AL596442.2-201ENST00000610240 980 ntBASIC12.38□□□□□ -0.43
APOC4P55056 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC4P55056 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC4P55056 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC4P55056 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
APOC4P55056 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC4P55056 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
APOC4P55056 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
APOC4P55056 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC4P55056 KRT8P49-201ENST00000604166 1432 ntBASIC12.37□□□□□ -0.43
APOC4P55056 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC4P55056 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.37□□□□□ -0.43
APOC4P55056 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.37□□□□□ -0.43
APOC4P55056 CNN2P11-201ENST00000429351 262 ntBASIC12.37□□□□□ -0.43
APOC4P55056 AC092183.1-201ENST00000469884 875 ntBASIC12.37□□□□□ -0.43
APOC4P55056 RN7SL589P-201ENST00000481268 310 ntBASIC12.37□□□□□ -0.43
APOC4P55056 AP000344.2-201ENST00000512987 629 ntBASIC12.37□□□□□ -0.43
APOC4P55056 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.37□□□□□ -0.43
APOC4P55056 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.37□□□□□ -0.43
APOC4P55056 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
APOC4P55056 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 BOC-212ENST00000485230 2173 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
APOC4P55056 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC4P55056 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC4P55056 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 LINC02012-201ENST00000608206 1725 ntBASIC12.37□□□□□ -0.43
APOC4P55056 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC4P55056 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC4P55056 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms