Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
CLTCL1P53675 AL139011.1-202ENST00000642063 584 ntBASIC23.86■■□□□ 1.41
CLTCL1P53675 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTCL1P53675 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTCL1P53675 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CLTCL1P53675 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTCL1P53675 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
CLTCL1P53675 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CLTCL1P53675 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.85■■□□□ 1.41
CLTCL1P53675 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
CLTCL1P53675 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
CLTCL1P53675 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC23.85■■□□□ 1.41
CLTCL1P53675 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC23.85■■□□□ 1.41
CLTCL1P53675 AL512638.1-201ENST00000457493 794 ntBASIC23.85■■□□□ 1.41
CLTCL1P53675 NAA50-208ENST00000497255 789 ntTSL 5 BASIC23.85■■□□□ 1.41
CLTCL1P53675 REEP4-207ENST00000523293 913 ntTSL 3 BASIC23.85■■□□□ 1.41
CLTCL1P53675 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC23.85■■□□□ 1.41
CLTCL1P53675 AC105021.1-202ENST00000570572 669 ntBASIC23.85■■□□□ 1.41
CLTCL1P53675 PRR29-204ENST00000577953 565 ntTSL 4 BASIC23.85■■□□□ 1.41
CLTCL1P53675 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC23.85■■□□□ 1.41
CLTCL1P53675 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC23.85■■□□□ 1.41
CLTCL1P53675 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CLTCL1P53675 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC23.85■■□□□ 1.41
CLTCL1P53675 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CLTCL1P53675 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CLTCL1P53675 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC23.85■■□□□ 1.41
CLTCL1P53675 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CLTCL1P53675 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CLTCL1P53675 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLTCL1P53675 AC141586.5-201ENST00000624546 2050 ntBASIC23.85■■□□□ 1.41
CLTCL1P53675 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 VMO1-203ENST00000416307 712 ntTSL 2 BASIC23.84■■□□□ 1.41
CLTCL1P53675 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CLTCL1P53675 AL079307.3-201ENST00000556114 283 ntBASIC23.84■■□□□ 1.41
CLTCL1P53675 RNA5-8SN1-201ENST00000610460 153 ntBASIC23.84■■□□□ 1.41
CLTCL1P53675 RNA5-8SN5-202ENST00000612463 153 ntBASIC23.84■■□□□ 1.41
CLTCL1P53675 RNA5-8SN4-201ENST00000613359 153 ntBASIC23.84■■□□□ 1.41
CLTCL1P53675 RNA5-8SN5-201ENST00000619471 153 ntBASIC23.84■■□□□ 1.41
CLTCL1P53675 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC23.84■■□□□ 1.41
CLTCL1P53675 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CLTCL1P53675 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CLTCL1P53675 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 AC007613.1-201ENST00000572811 2597 ntBASIC23.84■■□□□ 1.41
CLTCL1P53675 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC23.84■■□□□ 1.41
CLTCL1P53675 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC23.84■■□□□ 1.41
CLTCL1P53675 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC23.84■■□□□ 1.41
CLTCL1P53675 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC23.84■■□□□ 1.41
CLTCL1P53675 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLTCL1P53675 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC23.84■■□□□ 1.41
CLTCL1P53675 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC23.84■■□□□ 1.41
CLTCL1P53675 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC23.84■■□□□ 1.41
CLTCL1P53675 ARL16-202ENST00000570561 768 ntTSL 2 BASIC23.84■■□□□ 1.41
CLTCL1P53675 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.84■■□□□ 1.41
CLTCL1P53675 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.84■■□□□ 1.41
CLTCL1P53675 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CLTCL1P53675 PKD1P6-201ENST00000343738 4769 ntBASIC23.83■■□□□ 1.41
CLTCL1P53675 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CLTCL1P53675 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLTCL1P53675 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CLTCL1P53675 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTCL1P53675 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CLTCL1P53675 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTCL1P53675 RBM39-205ENST00000397370 612 ntTSL 2 BASIC23.83■■□□□ 1.41
CLTCL1P53675 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC23.83■■□□□ 1.41
CLTCL1P53675 AL662799.1-202ENST00000614205 422 ntBASIC23.83■■□□□ 1.41
CLTCL1P53675 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CLTCL1P53675 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC23.83■■□□□ 1.41
CLTCL1P53675 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLTCL1P53675 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CLTCL1P53675 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CLTCL1P53675 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CLTCL1P53675 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC23.83■■□□□ 1.4
CLTCL1P53675 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.83■■□□□ 1.4
CLTCL1P53675 AL031731.1-201ENST00000642131 2094 ntBASIC23.83■■□□□ 1.4
CLTCL1P53675 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTCL1P53675 AL512652.2-201ENST00000625156 1716 ntBASIC23.82■■□□□ 1.4
CLTCL1P53675 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC23.82■■□□□ 1.4
CLTCL1P53675 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CLTCL1P53675 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC23.82■■□□□ 1.4
CLTCL1P53675 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLTCL1P53675 AC087499.5-201ENST00000452760 1342 ntBASIC23.82■■□□□ 1.4
CLTCL1P53675 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLTCL1P53675 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTCL1P53675 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLTCL1P53675 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms