Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC107918.2-201ENST00000530817 355 ntBASIC16.43■□□□□ 0.22
PDX1P52945 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDX1P52945 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
PDX1P52945 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDX1P52945 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDX1P52945 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.43■□□□□ 0.22
PDX1P52945 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.43■□□□□ 0.22
PDX1P52945 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDX1P52945 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.43■□□□□ 0.22
PDX1P52945 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDX1P52945 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDX1P52945 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDX1P52945 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.43■□□□□ 0.22
PDX1P52945 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.43■□□□□ 0.22
PDX1P52945 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDX1P52945 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDX1P52945 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.43■□□□□ 0.22
PDX1P52945 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 CROCCP2-202ENST00000412962 2773 ntBASIC16.42■□□□□ 0.22
PDX1P52945 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.42■□□□□ 0.22
PDX1P52945 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.42■□□□□ 0.22
PDX1P52945 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.42■□□□□ 0.22
PDX1P52945 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 AC005498.2-205ENST00000593218 784 ntBASIC16.42■□□□□ 0.22
PDX1P52945 AL096865.1-201ENST00000606796 927 ntBASIC16.42■□□□□ 0.22
PDX1P52945 LINC00628-201ENST00000628516 1289 ntBASIC16.42■□□□□ 0.22
PDX1P52945 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.42■□□□□ 0.22
PDX1P52945 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.42■□□□□ 0.22
PDX1P52945 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDX1P52945 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDX1P52945 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDX1P52945 AL023806.1-201ENST00000603994 1649 ntBASIC16.41■□□□□ 0.22
PDX1P52945 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDX1P52945 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.41■□□□□ 0.22
PDX1P52945 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 AL627223.1-201ENST00000416693 442 ntBASIC16.41■□□□□ 0.22
PDX1P52945 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDX1P52945 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.41■□□□□ 0.22
PDX1P52945 TIMM8BP1-201ENST00000452384 211 ntBASIC16.41■□□□□ 0.22
PDX1P52945 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.41■□□□□ 0.22
PDX1P52945 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PDX1P52945 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
PDX1P52945 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.41■□□□□ 0.22
PDX1P52945 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PDX1P52945 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 AC009093.7-201ENST00000623853 1223 ntBASIC16.41■□□□□ 0.22
PDX1P52945 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.41■□□□□ 0.22
PDX1P52945 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.41■□□□□ 0.22
PDX1P52945 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.41■□□□□ 0.22
PDX1P52945 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.41■□□□□ 0.22
PDX1P52945 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDX1P52945 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 AC012313.1-201ENST00000593393 3059 ntBASIC16.41■□□□□ 0.22
PDX1P52945 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
PDX1P52945 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.41■□□□□ 0.22
PDX1P52945 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.41■□□□□ 0.22
PDX1P52945 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDX1P52945 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDX1P52945 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms