Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CLCN4P51793 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLCN4P51793 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCN4P51793 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CLCN4P51793 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN4P51793 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN4P51793 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN4P51793 AL138918.1-201ENST00000568306 659 ntBASIC17.71■□□□□ 0.43
CLCN4P51793 MPDU1-223ENST00000582151 728 ntBASIC17.71■□□□□ 0.43
CLCN4P51793 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN4P51793 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN4P51793 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN4P51793 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLCN4P51793 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN4P51793 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN4P51793 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN4P51793 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLCN4P51793 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLCN4P51793 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN4P51793 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLCN4P51793 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN4P51793 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCN4P51793 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN4P51793 SLC25A1P3-201ENST00000395415 828 ntBASIC17.7■□□□□ 0.42
CLCN4P51793 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN4P51793 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN4P51793 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN4P51793 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CLCN4P51793 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLCN4P51793 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN4P51793 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN4P51793 AC093525.9-201ENST00000624961 1746 ntBASIC17.69■□□□□ 0.42
CLCN4P51793 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLCN4P51793 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLCN4P51793 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN4P51793 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN4P51793 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN4P51793 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN4P51793 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN4P51793 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN4P51793 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.69■□□□□ 0.42
CLCN4P51793 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLCN4P51793 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN4P51793 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN4P51793 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN4P51793 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms