Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 COX5BP2-201ENST00000392354 334 ntBASIC13.42□□□□□ -0.26
CDC34P49427 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.42□□□□□ -0.26
CDC34P49427 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 AL122018.1-201ENST00000446607 2310 ntBASIC13.42□□□□□ -0.26
CDC34P49427 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CDC34P49427 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.41□□□□□ -0.26
CDC34P49427 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDC34P49427 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC34P49427 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC34P49427 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CDC34P49427 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 AP000523.1-201ENST00000398242 1049 ntBASIC13.41□□□□□ -0.26
CDC34P49427 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CDC34P49427 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 AC107956.1-201ENST00000494359 873 ntBASIC13.41□□□□□ -0.26
CDC34P49427 AC109462.3-201ENST00000573934 613 ntBASIC13.41□□□□□ -0.26
CDC34P49427 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.41□□□□□ -0.26
CDC34P49427 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC34P49427 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CDC34P49427 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC34P49427 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CDC34P49427 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 DBET-201ENST00000630918 3363 ntBASIC13.41□□□□□ -0.26
CDC34P49427 AC092384.3-202ENST00000564646 2873 ntBASIC13.41□□□□□ -0.26
CDC34P49427 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC34P49427 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDC34P49427 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC34P49427 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 AL645728.1-201ENST00000366221 2101 ntBASIC13.4□□□□□ -0.26
CDC34P49427 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC34P49427 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC34P49427 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
CDC34P49427 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms