Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ARCN1P48444 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARCN1P48444 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
ARCN1P48444 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.96■□□□□ 0.3
ARCN1P48444 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.96■□□□□ 0.3
ARCN1P48444 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.96■□□□□ 0.3
ARCN1P48444 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.96■□□□□ 0.3
ARCN1P48444 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ARCN1P48444 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 AC006504.4-201ENST00000592118 1568 ntBASIC16.95■□□□□ 0.3
ARCN1P48444 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 AP000347.1-202ENST00000435868 847 ntBASIC16.95■□□□□ 0.3
ARCN1P48444 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.95■□□□□ 0.3
ARCN1P48444 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.95■□□□□ 0.3
ARCN1P48444 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ARCN1P48444 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 AC013467.2-201ENST00000605472 835 ntBASIC16.95■□□□□ 0.3
ARCN1P48444 MIR7706-201ENST00000613747 67 ntBASIC16.95■□□□□ 0.3
ARCN1P48444 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ARCN1P48444 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ARCN1P48444 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.95■□□□□ 0.3
ARCN1P48444 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ARCN1P48444 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ARCN1P48444 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ARCN1P48444 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.94■□□□□ 0.3
ARCN1P48444 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.94■□□□□ 0.3
ARCN1P48444 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.94■□□□□ 0.3
ARCN1P48444 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.94■□□□□ 0.3
ARCN1P48444 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.94■□□□□ 0.3
ARCN1P48444 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
ARCN1P48444 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 FAM215A-202ENST00000632077 792 ntBASIC16.94■□□□□ 0.3
ARCN1P48444 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ARCN1P48444 AC107918.4-202ENST00000641623 219 ntBASIC16.94■□□□□ 0.3
ARCN1P48444 AC006277.1-201ENST00000624348 1610 ntBASIC16.94■□□□□ 0.3
ARCN1P48444 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 AC018695.7-201ENST00000624587 2492 ntBASIC16.94■□□□□ 0.3
ARCN1P48444 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.94■□□□□ 0.3
ARCN1P48444 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ARCN1P48444 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ARCN1P48444 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 TOP3BP1-201ENST00000420768 1380 ntBASIC16.93■□□□□ 0.3
ARCN1P48444 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.93■□□□□ 0.3
ARCN1P48444 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.93■□□□□ 0.3
ARCN1P48444 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.93■□□□□ 0.3
ARCN1P48444 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
ARCN1P48444 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.93■□□□□ 0.3
ARCN1P48444 AC120114.3-201ENST00000611923 658 ntBASIC16.93■□□□□ 0.3
ARCN1P48444 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ARCN1P48444 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ARCN1P48444 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.93■□□□□ 0.3
ARCN1P48444 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ARCN1P48444 REXO1L3P-201ENST00000622202 1288 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms