Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SSR1P43307 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.07■□□□□ 0.48
SSR1P43307 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.06■□□□□ 0.48
SSR1P43307 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.06■□□□□ 0.48
SSR1P43307 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SSR1P43307 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
SSR1P43307 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.06■□□□□ 0.48
SSR1P43307 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.06■□□□□ 0.48
SSR1P43307 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SSR1P43307 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SSR1P43307 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 PMPCAP1-201ENST00000508114 1576 ntBASIC18.06■□□□□ 0.48
SSR1P43307 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 AL020989.1-201ENST00000422979 469 ntBASIC18.06■□□□□ 0.48
SSR1P43307 ATP5G2P1-201ENST00000433580 426 ntBASIC18.06■□□□□ 0.48
SSR1P43307 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.06■□□□□ 0.48
SSR1P43307 MIR5100-201ENST00000579544 119 ntBASIC18.06■□□□□ 0.48
SSR1P43307 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.06■□□□□ 0.48
SSR1P43307 AL591684.3-201ENST00000605187 298 ntBASIC18.06■□□□□ 0.48
SSR1P43307 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.06■□□□□ 0.48
SSR1P43307 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SSR1P43307 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.06■□□□□ 0.48
SSR1P43307 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 PCDHA14-201ENST00000506751 2298 ntBASIC18.06■□□□□ 0.48
SSR1P43307 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SSR1P43307 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SSR1P43307 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.06■□□□□ 0.48
SSR1P43307 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 AC148477.5-201ENST00000625164 1645 ntBASIC18.05■□□□□ 0.48
SSR1P43307 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
SSR1P43307 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SSR1P43307 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SSR1P43307 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.05■□□□□ 0.48
SSR1P43307 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.05■□□□□ 0.48
SSR1P43307 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.05■□□□□ 0.48
SSR1P43307 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SSR1P43307 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.05■□□□□ 0.48
SSR1P43307 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.05■□□□□ 0.48
SSR1P43307 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.05■□□□□ 0.48
SSR1P43307 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 GPR89P-201ENST00000407924 1495 ntBASIC18.05■□□□□ 0.48
SSR1P43307 AC007326.2-201ENST00000624224 7579 ntBASIC18.05■□□□□ 0.48
SSR1P43307 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SSR1P43307 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.05■□□□□ 0.48
SSR1P43307 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.05■□□□□ 0.48
SSR1P43307 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 FLJ38576-201ENST00000623820 2459 ntBASIC18.05■□□□□ 0.48
SSR1P43307 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SSR1P43307 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
SSR1P43307 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SSR1P43307 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.04■□□□□ 0.48
SSR1P43307 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.04■□□□□ 0.48
SSR1P43307 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.04■□□□□ 0.48
SSR1P43307 AGGF1P2-201ENST00000426656 2106 ntBASIC18.04■□□□□ 0.48
SSR1P43307 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SSR1P43307 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SSR1P43307 UPK3BP1-201ENST00000428678 509 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms