Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC092068.3-201ENST00000587894 2016 ntBASIC15.61■□□□□ 0.09
SLC1A3P43003 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC1A3P43003 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC1A3P43003 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC1A3P43003 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC1A3P43003 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC1A3P43003 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SLC1A3P43003 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC1A3P43003 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.6■□□□□ 0.09
SLC1A3P43003 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 AF238378.1-201ENST00000526806 358 ntBASIC15.6■□□□□ 0.09
SLC1A3P43003 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.6■□□□□ 0.09
SLC1A3P43003 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 IFNL4P1-201ENST00000607083 540 ntBASIC15.6■□□□□ 0.09
SLC1A3P43003 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.6■□□□□ 0.09
SLC1A3P43003 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC1A3P43003 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SLC1A3P43003 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
SLC1A3P43003 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SLC1A3P43003 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC1A3P43003 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC1A3P43003 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC1A3P43003 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SLC1A3P43003 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC1A3P43003 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.59■□□□□ 0.09
SLC1A3P43003 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SLC1A3P43003 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SLC1A3P43003 AC139887.3-201ENST00000568585 713 ntBASIC15.59■□□□□ 0.09
SLC1A3P43003 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.59■□□□□ 0.09
SLC1A3P43003 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC1A3P43003 MTDHP4-201ENST00000600287 670 ntBASIC15.59■□□□□ 0.09
SLC1A3P43003 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC1A3P43003 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC1A3P43003 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC1A3P43003 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC1A3P43003 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC1A3P43003 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC1A3P43003 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.58■□□□□ 0.09
SLC1A3P43003 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC1A3P43003 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SLC1A3P43003 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
SLC1A3P43003 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SLC1A3P43003 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC1A3P43003 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC1A3P43003 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC1A3P43003 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC1A3P43003 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC1A3P43003 LINC02199-201ENST00000506655 2702 ntBASIC15.58■□□□□ 0.08
SLC1A3P43003 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.58■□□□□ 0.08
SLC1A3P43003 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC1A3P43003 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC1A3P43003 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC1A3P43003 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.58■□□□□ 0.08
SLC1A3P43003 KRT126P-201ENST00000549467 1181 ntBASIC15.58■□□□□ 0.08
SLC1A3P43003 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC1A3P43003 AL691432.3-201ENST00000621860 400 ntBASIC15.58■□□□□ 0.08
SLC1A3P43003 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
SLC1A3P43003 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC1A3P43003 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
SLC1A3P43003 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC1A3P43003 AL590787.1-201ENST00000568856 1315 ntBASIC15.58■□□□□ 0.08
SLC1A3P43003 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
SLC1A3P43003 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC1A3P43003 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC1A3P43003 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC1A3P43003 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC1A3P43003 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms