Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
MDH1P40925 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.03■□□□□ 0.32
MDH1P40925 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MDH1P40925 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MDH1P40925 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MDH1P40925 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MDH1P40925 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 MTCL1P1-201ENST00000446207 792 ntBASIC17.02■□□□□ 0.32
MDH1P40925 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.02■□□□□ 0.32
MDH1P40925 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.02■□□□□ 0.32
MDH1P40925 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.02■□□□□ 0.32
MDH1P40925 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MDH1P40925 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MDH1P40925 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.02■□□□□ 0.31
MDH1P40925 LINC00895-201ENST00000629028 1637 ntBASIC17.02■□□□□ 0.31
MDH1P40925 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MDH1P40925 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.02■□□□□ 0.31
MDH1P40925 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.02■□□□□ 0.31
MDH1P40925 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.02■□□□□ 0.31
MDH1P40925 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MDH1P40925 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MDH1P40925 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
MDH1P40925 AC006449.6-201ENST00000612330 2296 ntBASIC17.01■□□□□ 0.31
MDH1P40925 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.01■□□□□ 0.31
MDH1P40925 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.01■□□□□ 0.31
MDH1P40925 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MDH1P40925 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MDH1P40925 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.01■□□□□ 0.31
MDH1P40925 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.01■□□□□ 0.31
MDH1P40925 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.01■□□□□ 0.31
MDH1P40925 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.01■□□□□ 0.31
MDH1P40925 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 AC009947.2-201ENST00000444014 672 ntBASIC17.01■□□□□ 0.31
MDH1P40925 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.01■□□□□ 0.31
MDH1P40925 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.01■□□□□ 0.31
MDH1P40925 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.01■□□□□ 0.31
MDH1P40925 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.01■□□□□ 0.31
MDH1P40925 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.01■□□□□ 0.31
MDH1P40925 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MDH1P40925 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MDH1P40925 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MDH1P40925 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MDH1P40925 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.01■□□□□ 0.31
MDH1P40925 AL135999.2-201ENST00000622438 1686 ntBASIC17.01■□□□□ 0.31
MDH1P40925 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MDH1P40925 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MDH1P40925 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms