Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.06■□□□□ 0.16
RORAP35398 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.06■□□□□ 0.16
RORAP35398 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.06■□□□□ 0.16
RORAP35398 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RORAP35398 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.06■□□□□ 0.16
RORAP35398 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.06■□□□□ 0.16
RORAP35398 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.06■□□□□ 0.16
RORAP35398 AC112191.1-201ENST00000523689 701 ntBASIC16.06■□□□□ 0.16
RORAP35398 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.06■□□□□ 0.16
RORAP35398 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.06■□□□□ 0.16
RORAP35398 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.06■□□□□ 0.16
RORAP35398 AC027612.4-201ENST00000605371 583 ntBASIC16.06■□□□□ 0.16
RORAP35398 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.06■□□□□ 0.16
RORAP35398 AL513210.1-201ENST00000629608 234 ntBASIC16.06■□□□□ 0.16
RORAP35398 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.06■□□□□ 0.16
RORAP35398 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RORAP35398 AC011270.2-201ENST00000624293 2550 ntBASIC16.06■□□□□ 0.16
RORAP35398 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.06■□□□□ 0.16
RORAP35398 AL139384.1-201ENST00000612143 3047 ntBASIC16.05■□□□□ 0.16
RORAP35398 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.05■□□□□ 0.16
RORAP35398 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.05■□□□□ 0.16
RORAP35398 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
RORAP35398 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.05■□□□□ 0.16
RORAP35398 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RORAP35398 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RORAP35398 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RORAP35398 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 ADH5P3-201ENST00000433842 1137 ntBASIC16.05■□□□□ 0.16
RORAP35398 AC140658.5-201ENST00000438532 169 ntBASIC16.05■□□□□ 0.16
RORAP35398 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.05■□□□□ 0.16
RORAP35398 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.05■□□□□ 0.16
RORAP35398 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.05■□□□□ 0.16
RORAP35398 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.05■□□□□ 0.16
RORAP35398 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 AC105339.1-204ENST00000636249 355 ntBASIC16.05■□□□□ 0.16
RORAP35398 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RORAP35398 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 AC012313.1-201ENST00000593393 3059 ntBASIC16.05■□□□□ 0.16
RORAP35398 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RORAP35398 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RORAP35398 AL121761.2-201ENST00000598007 1648 ntBASIC16.05■□□□□ 0.16
RORAP35398 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RORAP35398 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.04■□□□□ 0.16
RORAP35398 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.04■□□□□ 0.16
RORAP35398 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.04■□□□□ 0.16
RORAP35398 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RORAP35398 AC002056.1-201ENST00000395613 760 ntBASIC16.04■□□□□ 0.16
RORAP35398 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.04■□□□□ 0.16
RORAP35398 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.04■□□□□ 0.16
RORAP35398 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RORAP35398 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.04■□□□□ 0.16
RORAP35398 AC005412.3-201ENST00000580309 715 ntBASIC16.04■□□□□ 0.16
RORAP35398 MIR4515-201ENST00000584082 81 ntBASIC16.04■□□□□ 0.16
RORAP35398 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.04■□□□□ 0.16
RORAP35398 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.04■□□□□ 0.16
RORAP35398 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms