Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC092068.3-201ENST00000587894 2016 ntBASIC18.26■□□□□ 0.51
HOXC8P31273 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
HOXC8P31273 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC8P31273 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC8P31273 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
HOXC8P31273 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 AC063926.2-201ENST00000623766 1308 ntBASIC18.25■□□□□ 0.51
HOXC8P31273 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 PCDHB17P-201ENST00000539533 2393 ntBASIC18.25■□□□□ 0.51
HOXC8P31273 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 AC005034.1-201ENST00000426657 489 ntBASIC18.25■□□□□ 0.51
HOXC8P31273 AL353705.2-201ENST00000428243 662 ntBASIC18.25■□□□□ 0.51
HOXC8P31273 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.25■□□□□ 0.51
HOXC8P31273 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.25■□□□□ 0.51
HOXC8P31273 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXC8P31273 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXC8P31273 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXC8P31273 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.25■□□□□ 0.51
HOXC8P31273 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXC8P31273 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HOXC8P31273 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXC8P31273 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.25■□□□□ 0.51
HOXC8P31273 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.25■□□□□ 0.51
HOXC8P31273 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.25■□□□□ 0.51
HOXC8P31273 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.25■□□□□ 0.51
HOXC8P31273 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HOXC8P31273 AC087499.5-201ENST00000452760 1342 ntBASIC18.24■□□□□ 0.51
HOXC8P31273 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.24■□□□□ 0.51
HOXC8P31273 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 PIN1P1-201ENST00000412108 996 ntBASIC18.24■□□□□ 0.51
HOXC8P31273 RPL37AP1-201ENST00000412502 279 ntBASIC18.24■□□□□ 0.51
HOXC8P31273 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
HOXC8P31273 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
HOXC8P31273 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HOXC8P31273 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HOXC8P31273 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HOXC8P31273 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HOXC8P31273 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HOXC8P31273 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HOXC8P31273 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.23■□□□□ 0.51
HOXC8P31273 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HOXC8P31273 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
HOXC8P31273 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HOXC8P31273 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HOXC8P31273 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.23■□□□□ 0.51
HOXC8P31273 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.23■□□□□ 0.51
HOXC8P31273 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.23■□□□□ 0.51
HOXC8P31273 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.23■□□□□ 0.51
HOXC8P31273 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.23■□□□□ 0.51
HOXC8P31273 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.23■□□□□ 0.51
HOXC8P31273 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.23■□□□□ 0.51
HOXC8P31273 AC105021.1-202ENST00000570572 669 ntBASIC18.23■□□□□ 0.51
HOXC8P31273 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.23■□□□□ 0.51
HOXC8P31273 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.23■□□□□ 0.51
HOXC8P31273 RN7SL828P-201ENST00000607615 303 ntBASIC18.23■□□□□ 0.51
HOXC8P31273 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HOXC8P31273 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms