Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AC007064.4-201ENST00000637740 555 ntBASIC16.07■□□□□ 0.16
MMP11P24347 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP11P24347 AC116353.5-201ENST00000638148 1699 ntBASIC16.07■□□□□ 0.16
MMP11P24347 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP11P24347 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MMP11P24347 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP11P24347 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.06■□□□□ 0.16
MMP11P24347 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MMP11P24347 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MMP11P24347 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 PAWRP1-201ENST00000451083 565 ntBASIC16.06■□□□□ 0.16
MMP11P24347 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 YBX1P5-201ENST00000509441 847 ntBASIC16.06■□□□□ 0.16
MMP11P24347 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
MMP11P24347 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
MMP11P24347 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MMP11P24347 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MMP11P24347 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP11P24347 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
MMP11P24347 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP11P24347 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP11P24347 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP11P24347 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP11P24347 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP11P24347 BCAR1-209ENST00000546196 1340 ntBASIC16.05■□□□□ 0.16
MMP11P24347 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP11P24347 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 RPS8P6-201ENST00000426177 609 ntBASIC16.05■□□□□ 0.16
MMP11P24347 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
MMP11P24347 MKNK2P1-201ENST00000437526 628 ntBASIC16.05■□□□□ 0.16
MMP11P24347 AP006288.1-201ENST00000446065 395 ntBASIC16.05■□□□□ 0.16
MMP11P24347 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.05■□□□□ 0.16
MMP11P24347 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP11P24347 CXCL1P1-201ENST00000502804 216 ntBASIC16.05■□□□□ 0.16
MMP11P24347 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP11P24347 KRT19P2-202ENST00000557173 1012 ntBASIC16.05■□□□□ 0.16
MMP11P24347 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP11P24347 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP11P24347 AC023141.13-201ENST00000604991 943 ntBASIC16.05■□□□□ 0.16
MMP11P24347 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 UBALD1-205ENST00000590891 2641 ntBASIC16.05■□□□□ 0.16
MMP11P24347 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP11P24347 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms