Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NELFE-205ENST00000441998 1075 ntAPPRIS ALT2 TSL 510.81□□□□□ -0.683e-7■■□□□ 14.3
RPS3P23396 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.4□□□□□ -1.231e-6■■□□□ 14.3
RPS3P23396 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.18□□□□□ -1.261e-6■■□□□ 14.3
RPS3P23396 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.351e-6■■□□□ 14.3
RPS3P23396 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.25□□□□□ -1.411e-6■■□□□ 14.3
RPS3P23396 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.4■□□□□ 0.382e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.67■□□□□ 0.12e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-210ENST00000488338 533 ntTSL 314.54□□□□□ -0.082e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-208ENST00000474831 564 ntTSL 313.6□□□□□ -0.232e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.5□□□□□ -0.252e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC13.23□□□□□ -0.292e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC10.45□□□□□ -0.742e-7■■□□□ 14.3
RPS3P23396 LAMTOR4-203ENST00000460732 616 ntTSL 3 BASIC10.07□□□□□ -0.82e-7■■□□□ 14.3
RPS3P23396 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.113e-6■■□□□ 14.3
RPS3P23396 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.293e-6■■□□□ 14.3
RPS3P23396 ACSM3-208ENST00000563914 771 ntTSL 54.59□□□□□ -1.676e-11■■□□□ 14.3
RPS3P23396 SELENOI-203ENST00000447170 624 ntTSL 511.37□□□□□ -0.599e-9■■□□□ 14.3
RPS3P23396 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.499e-9■■□□□ 14.3
RPS3P23396 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.769e-9■■□□□ 14.3
RPS3P23396 SELENOI-202ENST00000442141 504 ntTSL 52.55□□□□□ -29e-9■■□□□ 14.3
RPS3P23396 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.242e-7■■□□□ 14.3
RPS3P23396 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.14■□□□□ 0.972e-7■■□□□ 14.3
RPS3P23396 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.49□□□□□ -0.252e-7■■□□□ 14.3
RPS3P23396 POLR2H-207ENST00000455712 823 ntTSL 312.42□□□□□ -0.422e-7■■□□□ 14.3
RPS3P23396 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC11.27□□□□□ -0.612e-7■■□□□ 14.3
RPS3P23396 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC10.76□□□□□ -0.692e-7■■□□□ 14.3
RPS3P23396 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC9.46□□□□□ -0.92e-7■■□□□ 14.3
RPS3P23396 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.122e-6■■□□□ 14.3
RPS3P23396 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.25□□□□□ -0.132e-6■■□□□ 14.3
RPS3P23396 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.19□□□□□ -0.142e-6■■□□□ 14.3
RPS3P23396 ABAT-212ENST00000566590 2423 ntTSL 1 (best)13.74□□□□□ -0.212e-6■■□□□ 14.3
RPS3P23396 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.482e-6■■□□□ 14.3
RPS3P23396 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.812e-6■■□□□ 14.3
RPS3P23396 GART-208ENST00000430874 1036 ntTSL 520.12■□□□□ 0.811e-6■■□□□ 14.3
RPS3P23396 GART-207ENST00000426819 837 ntTSL 57.55□□□□□ -1.21e-6■■□□□ 14.3
RPS3P23396 CALM2-207ENST00000484408 682 ntTSL 520.48■□□□□ 0.872e-11■■□□□ 14.3
RPS3P23396 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.645e-7■■□□□ 14.3
RPS3P23396 ATP5D-203ENST00000588538 1393 ntTSL 1 (best)18.57■□□□□ 0.565e-7■■□□□ 14.3
RPS3P23396 ATP5D-205ENST00000590265 1144 ntTSL 1 (best)18.36■□□□□ 0.535e-7■■□□□ 14.3
RPS3P23396 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.535e-7■■□□□ 14.3
RPS3P23396 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.025e-7■■□□□ 14.3
RPS3P23396 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.281e-6■■□□□ 14.3
RPS3P23396 PDLIM1-202ENST00000477757 850 ntTSL 219.02■□□□□ 0.642e-8■■□□□ 14.3
RPS3P23396 EIF4G1-237ENST00000485712 474 ntTSL 418.38■□□□□ 0.532e-9■■□□□ 14.3
RPS3P23396 CEP44-210ENST00000515299 913 ntTSL 517.5■□□□□ 0.392e-9■■□□□ 14.3
RPS3P23396 SF3A1-204ENST00000447376 418 ntTSL 515.97■□□□□ 0.152e-9■■□□□ 14.3
RPS3P23396 CEP44-209ENST00000514712 605 ntTSL 415.37■□□□□ 0.052e-9■■□□□ 14.3
RPS3P23396 KARS-212ENST00000570215 994 ntTSL 314.18□□□□□ -0.142e-6■■□□□ 14.3
RPS3P23396 EIF4G1-227ENST00000455679 542 ntTSL 413.08□□□□□ -0.322e-9■■□□□ 14.3
RPS3P23396 CEP44-205ENST00000503053 732 ntTSL 512.09□□□□□ -0.472e-9■■□□□ 14.3
RPS3P23396 EIF4G1-214ENST00000427141 730 ntTSL 511.92□□□□□ -0.52e-9■■□□□ 14.3
RPS3P23396 SF3B3-205ENST00000564899 551 ntTSL 410.96□□□□□ -0.652e-9■■□□□ 14.3
RPS3P23396 EIF4G1-220ENST00000440448 578 ntTSL 410.77□□□□□ -0.692e-9■■□□□ 14.3
RPS3P23396 EIF4G1-223ENST00000444134 558 ntTSL 510.65□□□□□ -0.72e-9■■□□□ 14.3
RPS3P23396 SF3A1-207ENST00000471342 459 ntTSL 29.78□□□□□ -0.842e-9■■□□□ 14.3
RPS3P23396 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC9.48□□□□□ -0.892e-9■■□□□ 14.3
RPS3P23396 SF3A1-206ENST00000471037 555 ntTSL 38.74□□□□□ -1.012e-9■■□□□ 14.3
RPS3P23396 CEP44-202ENST00000396791 3824 ntTSL 1 (best)8.68□□□□□ -1.022e-9■■□□□ 14.3
RPS3P23396 CEP44-207ENST00000505124 600 ntTSL 48.25□□□□□ -1.092e-9■■□□□ 14.3
RPS3P23396 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.432e-9■■□□□ 14.3
RPS3P23396 KARS-210ENST00000568682 870 ntTSL 35.92□□□□□ -1.462e-6■■□□□ 14.3
RPS3P23396 DDX5-225ENST00000583562 465 ntTSL 1 (best)5.82□□□□□ -1.482e-9■■□□□ 14.3
RPS3P23396 SLC5A6-208ENST00000430186 599 ntTSL 415.81■□□□□ 0.126e-8■■□□□ 14.3
RPS3P23396 SLC5A6-210ENST00000442731 542 ntTSL 413.39□□□□□ -0.276e-8■■□□□ 14.3
RPS3P23396 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.051e-8■■□□□ 14.3
RPS3P23396 NDUFAF8-202ENST00000573090 741 ntTSL 321.25■□□□□ 0.991e-8■■□□□ 14.3
RPS3P23396 NDUFAF8-206ENST00000577158 278 ntTSL 1 (best)19.4■□□□□ 0.71e-8■■□□□ 14.3
RPS3P23396 SLC46A1-203ENST00000582590 1435 ntTSL 218.6■□□□□ 0.571e-8■■□□□ 14.3
RPS3P23396 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.46■□□□□ 0.551e-8■■□□□ 14.3
RPS3P23396 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.341e-8■■□□□ 14.3
RPS3P23396 SLC46A1-205ENST00000584426 564 ntTSL 416.77■□□□□ 0.281e-8■■□□□ 14.3
RPS3P23396 SLC46A1-206ENST00000584995 1030 ntTSL 316.51■□□□□ 0.231e-8■■□□□ 14.3
RPS3P23396 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.17□□□□□ -0.31e-8■■□□□ 14.3
RPS3P23396 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.15□□□□□ -0.31e-8■■□□□ 14.3
RPS3P23396 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.381e-8■■□□□ 14.3
RPS3P23396 IGSF1-207ENST00000467244 849 ntTSL 211.26□□□□□ -0.612e-6■■□□□ 14.3
RPS3P23396 RNA5SP444-201ENST00000516844 106 ntBASIC10.04□□□□□ -0.81e-8■■□□□ 14.3
RPS3P23396 SLC46A1-202ENST00000581516 844 ntTSL 59.98□□□□□ -0.811e-8■■□□□ 14.3
RPS3P23396 TAB2-206ENST00000606202 648 ntTSL 41.06□□□□□ -2.241e-8■■□□□ 14.3
RPS3P23396 PRKCSH-214ENST00000591946 569 ntTSL 24.39□□□□□ -1.719e-11■■□□□ 14.3
RPS3P23396 JUP-212ENST00000591690 583 ntTSL 318.31■□□□□ 0.521e-6■■□□□ 14.3
RPS3P23396 CFB-274ENST00000461483 1277 ntTSL 510.79□□□□□ -0.688e-12■■□□□ 14.3
RPS3P23396 EWSR1-221ENST00000610553 2300 ntTSL 216.67■□□□□ 0.261e-10■■□□□ 14.3
RPS3P23396 POLD1-212ENST00000600859 3474 ntTSL 213.48□□□□□ -0.256e-7■■□□□ 14.3
RPS3P23396 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.276e-7■■□□□ 14.3
RPS3P23396 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.16□□□□□ -0.36e-7■■□□□ 14.3
RPS3P23396 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.95□□□□□ -0.346e-7■■□□□ 14.3
RPS3P23396 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.356e-7■■□□□ 14.3
RPS3P23396 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.852e-8■■□□□ 14.3
RPS3P23396 NDRG1-212ENST00000519278 3983 ntTSL 29.46□□□□□ -0.93e-8■■□□□ 14.3
RPS3P23396 APLP2-207ENST00000525604 1590 ntTSL 216.44■□□□□ 0.222e-11■■□□□ 14.3
RPS3P23396 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC12.56□□□□□ -0.44e-7■■□□□ 14.3
RPS3P23396 RPN2-208ENST00000470352 511 ntTSL 211.83□□□□□ -0.522e-19■■□□□ 14.3
RPS3P23396 LAMB1-207ENST00000468999 764 ntTSL 210.79□□□□□ -0.683e-12■■□□□ 14.3
RPS3P23396 CTNNA1-236ENST00000522792 2044 ntTSL 215.29■□□□□ 0.046e-8■■□□□ 14.3
RPS3P23396 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)22.35■■□□□ 1.173e-8■■□□□ 14.3
RPS3P23396 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.22■■□□□ 1.475e-8■■□□□ 14.3
RPS3P23396 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.45e-8■■□□□ 14.3
RPS3P23396 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.345e-8■■□□□ 14.3
Retrieved 100 of 24,271 protein–RNA pairs in 198.1 ms