RNA–Protein interactions for RNA: ENST00000568682.5

KARS-210, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-210ENST00000568682 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
KARS-210ENST00000568682 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
KARS-210ENST00000568682 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
KARS-210ENST00000568682 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
KARS-210ENST00000568682 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
KARS-210ENST00000568682 FOXD1Q16676 465 aa20.71■□□□□ 0.91
KARS-210ENST00000568682 PPP6R1Q9UPN7 881 aa20.15■□□□□ 0.82
KARS-210ENST00000568682 ADRA2BP18089 450 aa20.13■□□□□ 0.81
KARS-210ENST00000568682 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
KARS-210ENST00000568682 MSH5O43196 834 aa19.05■□□□□ 0.64
KARS-210ENST00000568682 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
KARS-210ENST00000568682 KCNA4P22459 653 aa18.72■□□□□ 0.59
KARS-210ENST00000568682 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
KARS-210ENST00000568682 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
KARS-210ENST00000568682 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
KARS-210ENST00000568682 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
KARS-210ENST00000568682 MAPK8IP2Q13387 824 aaPredicted RBP18.16■□□□□ 0.5
KARS-210ENST00000568682 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
KARS-210ENST00000568682 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
KARS-210ENST00000568682 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
KARS-210ENST00000568682 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
KARS-210ENST00000568682 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
KARS-210ENST00000568682 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
KARS-210ENST00000568682 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
KARS-210ENST00000568682 ZBTB22O15209 634 aa17.24■□□□□ 0.35
KARS-210ENST00000568682 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
KARS-210ENST00000568682 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
KARS-210ENST00000568682 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
KARS-210ENST00000568682 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
KARS-210ENST00000568682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.281e-7■■□□□ 12.8
KARS-210ENST00000568682 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
KARS-210ENST00000568682 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
KARS-210ENST00000568682 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
KARS-210ENST00000568682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
KARS-210ENST00000568682 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
KARS-210ENST00000568682 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
KARS-210ENST00000568682 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
KARS-210ENST00000568682 APLP2Q06481 763 aa16.32■□□□□ 0.2
KARS-210ENST00000568682 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
KARS-210ENST00000568682 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
KARS-210ENST00000568682 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
KARS-210ENST00000568682 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
KARS-210ENST00000568682 CAPN15O75808 1086 aa15.92■□□□□ 0.14
KARS-210ENST00000568682 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
KARS-210ENST00000568682 POLA2Q14181 598 aa15.75■□□□□ 0.11
KARS-210ENST00000568682 FKBP8Q14318 412 aa15.69■□□□□ 0.1
KARS-210ENST00000568682 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
KARS-210ENST00000568682 ABCB7O75027 752 aa15.62■□□□□ 0.09
KARS-210ENST00000568682 DSG3P32926 999 aa15.62■□□□□ 0.09
KARS-210ENST00000568682 FBLN2P98095 1184 aa15.62■□□□□ 0.09
KARS-210ENST00000568682 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
KARS-210ENST00000568682 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
KARS-210ENST00000568682 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
KARS-210ENST00000568682 PROM2Q8N271 834 aa15.28■□□□□ 0.04
KARS-210ENST00000568682 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
KARS-210ENST00000568682 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
KARS-210ENST00000568682 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
KARS-210ENST00000568682 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
KARS-210ENST00000568682 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
KARS-210ENST00000568682 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
KARS-210ENST00000568682 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
KARS-210ENST00000568682 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
KARS-210ENST00000568682 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
KARS-210ENST00000568682 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
KARS-210ENST00000568682 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
KARS-210ENST00000568682 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
KARS-210ENST00000568682 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
KARS-210ENST00000568682 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
KARS-210ENST00000568682 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
KARS-210ENST00000568682 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
KARS-210ENST00000568682 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
KARS-210ENST00000568682 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
KARS-210ENST00000568682 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
KARS-210ENST00000568682 MIER1Q8N108 512 aa14.55□□□□□ -0.08
KARS-210ENST00000568682 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
KARS-210ENST00000568682 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
KARS-210ENST00000568682 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
KARS-210ENST00000568682 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
KARS-210ENST00000568682 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
KARS-210ENST00000568682 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
KARS-210ENST00000568682 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
KARS-210ENST00000568682 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
KARS-210ENST00000568682 PKD2Q13563 968 aa14.31□□□□□ -0.12
KARS-210ENST00000568682 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
KARS-210ENST00000568682 NUBP1P53384 320 aa14.19□□□□□ -0.14
KARS-210ENST00000568682 ECM2O94769 699 aaPredicted RBP14.15□□□□□ -0.14
KARS-210ENST00000568682 FXR2P51116 673 aaKnown RBP eCLIP14.15□□□□□ -0.147e-7■■■□□ 16.9
KARS-210ENST00000568682 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
KARS-210ENST00000568682 GSE1Q14687 1217 aa14.14□□□□□ -0.15
KARS-210ENST00000568682 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
KARS-210ENST00000568682 CIZ1Q9ULV3 898 aaPredicted RBP14.14□□□□□ -0.15
KARS-210ENST00000568682 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
KARS-210ENST00000568682 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
KARS-210ENST00000568682 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
KARS-210ENST00000568682 FAM212AQ96EL1 285 aa14.07□□□□□ -0.16
KARS-210ENST00000568682 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
KARS-210ENST00000568682 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
KARS-210ENST00000568682 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
KARS-210ENST00000568682 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
KARS-210ENST00000568682 RGL2O15211 777 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms