Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFX1P22670 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX1P22670 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFX1P22670 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RFX1P22670 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.44■□□□□ 0.54
RFX1P22670 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RFX1P22670 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RFX1P22670 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RFX1P22670 NCF1C-201ENST00000438382 1427 ntBASIC18.43■□□□□ 0.54
RFX1P22670 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFX1P22670 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFX1P22670 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RFX1P22670 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
RFX1P22670 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.43■□□□□ 0.54
RFX1P22670 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RFX1P22670 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RFX1P22670 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.43■□□□□ 0.54
RFX1P22670 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.43■□□□□ 0.54
RFX1P22670 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.43■□□□□ 0.54
RFX1P22670 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 AC025062.2-201ENST00000605477 670 ntBASIC18.43■□□□□ 0.54
RFX1P22670 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFX1P22670 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
RFX1P22670 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX1P22670 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RFX1P22670 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX1P22670 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX1P22670 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 AC078925.2-201ENST00000624013 1973 ntBASIC18.42■□□□□ 0.54
RFX1P22670 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX1P22670 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 AC084018.2-201ENST00000613093 2607 ntBASIC18.42■□□□□ 0.54
RFX1P22670 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX1P22670 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 AP002414.3-201ENST00000589352 1468 ntBASIC18.42■□□□□ 0.54
RFX1P22670 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX1P22670 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RFX1P22670 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX1P22670 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX1P22670 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX1P22670 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.42■□□□□ 0.54
RFX1P22670 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX1P22670 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX1P22670 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX1P22670 MIR3197-201ENST00000582241 73 ntBASIC18.42■□□□□ 0.54
RFX1P22670 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX1P22670 AL353135.1-201ENST00000606729 504 ntBASIC18.42■□□□□ 0.54
RFX1P22670 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX1P22670 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX1P22670 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX1P22670 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX1P22670 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFX1P22670 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RFX1P22670 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.41■□□□□ 0.54
RFX1P22670 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX1P22670 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.41■□□□□ 0.54
RFX1P22670 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RFX1P22670 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.41■□□□□ 0.54
RFX1P22670 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms