Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
DEFA4P12838 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.83□□□□□ -0.19
DEFA4P12838 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
DEFA4P12838 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DEFA4P12838 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DEFA4P12838 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
DEFA4P12838 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DEFA4P12838 AL391005.1-201ENST00000623953 2435 ntBASIC13.83□□□□□ -0.19
DEFA4P12838 AC046185.3-201ENST00000623228 1824 ntBASIC13.83□□□□□ -0.2
DEFA4P12838 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.83□□□□□ -0.2
DEFA4P12838 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
DEFA4P12838 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
DEFA4P12838 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.83□□□□□ -0.2
DEFA4P12838 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.83□□□□□ -0.2
DEFA4P12838 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.83□□□□□ -0.2
DEFA4P12838 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.83□□□□□ -0.2
DEFA4P12838 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
DEFA4P12838 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
DEFA4P12838 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.83□□□□□ -0.2
DEFA4P12838 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.83□□□□□ -0.2
DEFA4P12838 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.83□□□□□ -0.2
DEFA4P12838 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.83□□□□□ -0.2
DEFA4P12838 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 KRT18P1-202ENST00000452408 1331 ntBASIC13.83□□□□□ -0.2
DEFA4P12838 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
DEFA4P12838 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
DEFA4P12838 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DEFA4P12838 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
DEFA4P12838 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.82□□□□□ -0.2
DEFA4P12838 AC068418.2-201ENST00000577309 3703 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 AC125634.1-201ENST00000438758 1403 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.82□□□□□ -0.2
DEFA4P12838 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
DEFA4P12838 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
DEFA4P12838 NORAD-201ENST00000565493 5339 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 FAM220CP-201ENST00000395253 831 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.82□□□□□ -0.2
DEFA4P12838 AC246785.2-201ENST00000432512 513 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 AC103564.2-201ENST00000432853 1299 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.82□□□□□ -0.2
DEFA4P12838 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.82□□□□□ -0.2
DEFA4P12838 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 AC009533.2-201ENST00000543664 586 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 AC109462.3-201ENST00000573934 613 ntBASIC13.82□□□□□ -0.2
DEFA4P12838 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
DEFA4P12838 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.82□□□□□ -0.2
DEFA4P12838 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
DEFA4P12838 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.82□□□□□ -0.2
DEFA4P12838 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.82□□□□□ -0.2
DEFA4P12838 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
DEFA4P12838 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.82□□□□□ -0.2
DEFA4P12838 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
DEFA4P12838 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DEFA4P12838 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms