Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLTAP09496 FRMD8P1-201ENST00000440433 1524 ntBASIC18.52■□□□□ 0.56
CLTAP09496 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLTAP09496 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.52■□□□□ 0.55
CLTAP09496 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLTAP09496 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLTAP09496 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLTAP09496 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLTAP09496 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
CLTAP09496 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLTAP09496 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLTAP09496 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLTAP09496 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLTAP09496 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLTAP09496 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.51■□□□□ 0.55
CLTAP09496 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.51■□□□□ 0.55
CLTAP09496 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLTAP09496 CXCL1P1-201ENST00000502804 216 ntBASIC18.51■□□□□ 0.55
CLTAP09496 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.51■□□□□ 0.55
CLTAP09496 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.51■□□□□ 0.55
CLTAP09496 AC040169.1-201ENST00000565382 521 ntBASIC18.51■□□□□ 0.55
CLTAP09496 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.51■□□□□ 0.55
CLTAP09496 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.51■□□□□ 0.55
CLTAP09496 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.51■□□□□ 0.55
CLTAP09496 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.51■□□□□ 0.55
CLTAP09496 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.51■□□□□ 0.55
CLTAP09496 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLTAP09496 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.5■□□□□ 0.55
CLTAP09496 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLTAP09496 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CLTAP09496 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.5■□□□□ 0.55
CLTAP09496 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 CROCCP1-201ENST00000426910 5675 ntBASIC18.5■□□□□ 0.55
CLTAP09496 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLTAP09496 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 RHOQP3-201ENST00000437982 621 ntBASIC18.5■□□□□ 0.55
CLTAP09496 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.5■□□□□ 0.55
CLTAP09496 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.5■□□□□ 0.55
CLTAP09496 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.5■□□□□ 0.55
CLTAP09496 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.5■□□□□ 0.55
CLTAP09496 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.5■□□□□ 0.55
CLTAP09496 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 AC010507.1-201ENST00000633895 436 ntBASIC18.5■□□□□ 0.55
CLTAP09496 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.5■□□□□ 0.55
CLTAP09496 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLTAP09496 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLTAP09496 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLTAP09496 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.49■□□□□ 0.55
CLTAP09496 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLTAP09496 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLTAP09496 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLTAP09496 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLTAP09496 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLTAP09496 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.49■□□□□ 0.55
CLTAP09496 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLTAP09496 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLTAP09496 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms