Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
THBS1P07996 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.59■□□□□ 0.09
THBS1P07996 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
THBS1P07996 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.58■□□□□ 0.09
THBS1P07996 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
THBS1P07996 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.58■□□□□ 0.09
THBS1P07996 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
THBS1P07996 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
THBS1P07996 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
THBS1P07996 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.58■□□□□ 0.08
THBS1P07996 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.58■□□□□ 0.08
THBS1P07996 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.58■□□□□ 0.08
THBS1P07996 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
THBS1P07996 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.58■□□□□ 0.08
THBS1P07996 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.58■□□□□ 0.08
THBS1P07996 LAGE3P1-201ENST00000425356 484 ntBASIC15.58■□□□□ 0.08
THBS1P07996 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.58■□□□□ 0.08
THBS1P07996 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
THBS1P07996 AC006557.2-201ENST00000592985 1240 ntBASIC15.58■□□□□ 0.08
THBS1P07996 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
THBS1P07996 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.58■□□□□ 0.08
THBS1P07996 AL805961.1-202ENST00000641562 540 ntBASIC15.58■□□□□ 0.08
THBS1P07996 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.58■□□□□ 0.08
THBS1P07996 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.58■□□□□ 0.08
THBS1P07996 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
THBS1P07996 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.58■□□□□ 0.08
THBS1P07996 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
THBS1P07996 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
THBS1P07996 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
THBS1P07996 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
THBS1P07996 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.57■□□□□ 0.08
THBS1P07996 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.57■□□□□ 0.08
THBS1P07996 STK33P1-201ENST00000423835 1218 ntBASIC15.57■□□□□ 0.08
THBS1P07996 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
THBS1P07996 AC087163.2-201ENST00000457299 853 ntBASIC15.57■□□□□ 0.08
THBS1P07996 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.57■□□□□ 0.08
THBS1P07996 AP002469.2-201ENST00000531724 424 ntBASIC15.57■□□□□ 0.08
THBS1P07996 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.57■□□□□ 0.08
THBS1P07996 SLC25A6P4-201ENST00000586535 553 ntBASIC15.57■□□□□ 0.08
THBS1P07996 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
THBS1P07996 AC025062.2-201ENST00000605477 670 ntBASIC15.57■□□□□ 0.08
THBS1P07996 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
THBS1P07996 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.57■□□□□ 0.08
THBS1P07996 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
THBS1P07996 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
THBS1P07996 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
THBS1P07996 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
THBS1P07996 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.56■□□□□ 0.08
THBS1P07996 PTCHD3P3-201ENST00000403073 906 ntBASIC15.56■□□□□ 0.08
THBS1P07996 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.56■□□□□ 0.08
THBS1P07996 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.56■□□□□ 0.08
THBS1P07996 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
THBS1P07996 AC021087.4-201ENST00000563761 564 ntBASIC15.56■□□□□ 0.08
THBS1P07996 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
THBS1P07996 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms