Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.76■□□□□ 0.43
RB1P06400 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RB1P06400 AL391825.1-201ENST00000457671 1364 ntBASIC17.76■□□□□ 0.43
RB1P06400 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
RB1P06400 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.76■□□□□ 0.43
RB1P06400 BTBD7P1-201ENST00000447253 1453 ntBASIC17.75■□□□□ 0.43
RB1P06400 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RB1P06400 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 BICD1-207ENST00000551848 1962 ntBASIC17.75■□□□□ 0.43
RB1P06400 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.75■□□□□ 0.43
RB1P06400 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RB1P06400 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 AC016396.2-201ENST00000562575 1417 ntBASIC17.75■□□□□ 0.43
RB1P06400 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
RB1P06400 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 ABALON-201ENST00000629058 1903 ntBASIC17.75■□□□□ 0.43
RB1P06400 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.75■□□□□ 0.43
RB1P06400 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 ZNF890P-202ENST00000530367 1156 ntBASIC17.75■□□□□ 0.43
RB1P06400 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.75■□□□□ 0.43
RB1P06400 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.75■□□□□ 0.43
RB1P06400 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.75■□□□□ 0.43
RB1P06400 SPTSSB-204ENST00000617024 1292 ntBASIC17.75■□□□□ 0.43
RB1P06400 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RB1P06400 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RB1P06400 FOXO1B-201ENST00000504678 1527 ntBASIC17.75■□□□□ 0.43
RB1P06400 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RB1P06400 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RB1P06400 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RB1P06400 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RB1P06400 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RB1P06400 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.74■□□□□ 0.43
RB1P06400 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RB1P06400 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RB1P06400 AC135050.7-201ENST00000624508 2218 ntBASIC17.74■□□□□ 0.43
RB1P06400 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
RB1P06400 AC087499.6-201ENST00000411576 835 ntBASIC17.74■□□□□ 0.43
RB1P06400 RPL37AP1-201ENST00000412502 279 ntBASIC17.74■□□□□ 0.43
RB1P06400 DFFBP1-201ENST00000433250 979 ntBASIC17.74■□□□□ 0.43
RB1P06400 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RB1P06400 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.74■□□□□ 0.43
RB1P06400 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RB1P06400 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.74■□□□□ 0.43
RB1P06400 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.74■□□□□ 0.43
RB1P06400 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.74■□□□□ 0.43
RB1P06400 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.74■□□□□ 0.43
RB1P06400 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.74■□□□□ 0.43
RB1P06400 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RB1P06400 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RB1P06400 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RB1P06400 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RB1P06400 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RB1P06400 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.73■□□□□ 0.43
RB1P06400 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.73■□□□□ 0.43
RB1P06400 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.73■□□□□ 0.43
RB1P06400 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RB1P06400 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RB1P06400 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RB1P06400 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 MTND6P24-201ENST00000440466 518 ntBASIC17.73■□□□□ 0.43
RB1P06400 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms