Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.93□□□□□ -0.34
TCRAP04437 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TCRAP04437 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 Z83836.1-201ENST00000624605 1642 ntBASIC12.92□□□□□ -0.34
TCRAP04437 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 AC003669.1-201ENST00000334569 611 ntBASIC12.92□□□□□ -0.34
TCRAP04437 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TCRAP04437 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TCRAP04437 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.92□□□□□ -0.34
TCRAP04437 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRAP04437 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TCRAP04437 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TCRAP04437 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TCRAP04437 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRAP04437 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TCRAP04437 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRAP04437 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TCRAP04437 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.91□□□□□ -0.34
TCRAP04437 LIN28AP1-201ENST00000429574 405 ntBASIC12.91□□□□□ -0.34
TCRAP04437 SLC25A3P1-201ENST00000443844 931 ntBASIC12.91□□□□□ -0.34
TCRAP04437 ATP5G1P1-201ENST00000448724 379 ntBASIC12.91□□□□□ -0.34
TCRAP04437 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRAP04437 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRAP04437 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRAP04437 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 AL138831.2-201ENST00000606564 490 ntBASIC12.91□□□□□ -0.34
TCRAP04437 AC073912.3-201ENST00000624414 853 ntBASIC12.91□□□□□ -0.34
TCRAP04437 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
TCRAP04437 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRAP04437 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRAP04437 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRAP04437 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms