Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HMGCRP04035 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 AC098614.1-201ENST00000368528 745 ntBASIC18.97■□□□□ 0.63
HMGCRP04035 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.97■□□□□ 0.63
HMGCRP04035 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
HMGCRP04035 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMGCRP04035 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMGCRP04035 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HMGCRP04035 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCRP04035 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 AL353779.1-201ENST00000434793 351 ntBASIC18.96■□□□□ 0.63
HMGCRP04035 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 HILS1-202ENST00000545329 423 ntBASIC18.96■□□□□ 0.63
HMGCRP04035 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.96■□□□□ 0.63
HMGCRP04035 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCRP04035 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HMGCRP04035 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCRP04035 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.96■□□□□ 0.63
HMGCRP04035 AC007541.1-201ENST00000570282 1469 ntBASIC18.96■□□□□ 0.63
HMGCRP04035 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMGCRP04035 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
HMGCRP04035 LYSMD4-203ENST00000378904 2122 ntBASIC18.95■□□□□ 0.62
HMGCRP04035 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCRP04035 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMGCRP04035 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCRP04035 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCRP04035 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCRP04035 GIMAP3P-201ENST00000495150 836 ntBASIC18.95■□□□□ 0.62
HMGCRP04035 API5-211ENST00000534695 560 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCRP04035 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCRP04035 AC010336.2-201ENST00000564226 506 ntBASIC18.95■□□□□ 0.62
HMGCRP04035 AC008738.7-201ENST00000609744 511 ntBASIC18.95■□□□□ 0.62
HMGCRP04035 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCRP04035 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGCRP04035 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCRP04035 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCRP04035 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCRP04035 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 AL035456.1-201ENST00000456064 1369 ntBASIC18.94■□□□□ 0.62
HMGCRP04035 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCRP04035 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCRP04035 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMGCRP04035 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCRP04035 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCRP04035 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms