Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.79□□□□□ -0.36
LTAP01374 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
LTAP01374 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 AC125634.1-201ENST00000438758 1403 ntBASIC12.79□□□□□ -0.36
LTAP01374 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.79□□□□□ -0.36
LTAP01374 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LTAP01374 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.78□□□□□ -0.36
LTAP01374 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LTAP01374 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.78□□□□□ -0.36
LTAP01374 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.78□□□□□ -0.36
LTAP01374 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.78□□□□□ -0.36
LTAP01374 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.78□□□□□ -0.36
LTAP01374 MMP23A-201ENST00000234610 1017 ntBASIC12.78□□□□□ -0.36
LTAP01374 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.78□□□□□ -0.36
LTAP01374 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 FAM220CP-201ENST00000395253 831 ntBASIC12.78□□□□□ -0.36
LTAP01374 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LTAP01374 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.78□□□□□ -0.36
LTAP01374 AC008550.1-201ENST00000511500 884 ntBASIC12.78□□□□□ -0.36
LTAP01374 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.78□□□□□ -0.36
LTAP01374 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.78□□□□□ -0.36
LTAP01374 DUX4L17-201ENST00000557360 1267 ntBASIC12.78□□□□□ -0.36
LTAP01374 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.78□□□□□ -0.36
LTAP01374 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.78□□□□□ -0.36
LTAP01374 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LTAP01374 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.78□□□□□ -0.36
LTAP01374 AL021920.2-201ENST00000624828 1351 ntBASIC12.78□□□□□ -0.36
LTAP01374 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
LTAP01374 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LTAP01374 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
LTAP01374 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LTAP01374 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LTAP01374 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LTAP01374 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.77□□□□□ -0.36
LTAP01374 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
LTAP01374 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LTAP01374 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LTAP01374 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LTAP01374 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.77□□□□□ -0.37
LTAP01374 AC003669.1-201ENST00000334569 611 ntBASIC12.77□□□□□ -0.37
LTAP01374 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.77□□□□□ -0.37
LTAP01374 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.77□□□□□ -0.37
LTAP01374 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.77□□□□□ -0.37
LTAP01374 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.77□□□□□ -0.37
LTAP01374 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.77□□□□□ -0.37
LTAP01374 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.77□□□□□ -0.37
LTAP01374 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LTAP01374 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.77□□□□□ -0.37
LTAP01374 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.77□□□□□ -0.37
LTAP01374 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.77□□□□□ -0.37
LTAP01374 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LTAP01374 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms