Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PPP1R3DO95685 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PPP1R3DO95685 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PPP1R3DO95685 AC092364.2-201ENST00000596710 2692 ntBASIC15.33■□□□□ 0.05
PPP1R3DO95685 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PPP1R3DO95685 AC008894.3-201ENST00000624324 3103 ntBASIC15.33■□□□□ 0.05
PPP1R3DO95685 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PPP1R3DO95685 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 NUS1P2-201ENST00000417358 873 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 POM121L3P-201ENST00000419331 1163 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 LINC00982-205ENST00000420957 435 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 DUX4L17-201ENST00000557360 1267 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 MIR3180-1-201ENST00000580374 94 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 MIR3180-3-201ENST00000584616 94 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 AC092329.2-201ENST00000598402 547 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 AC099336.1-202ENST00000602961 463 ntBASIC15.33■□□□□ 0.04
PPP1R3DO95685 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPP1R3DO95685 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PPP1R3DO95685 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.32■□□□□ 0.04
PPP1R3DO95685 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 LINC02199-201ENST00000506655 2702 ntBASIC15.32■□□□□ 0.04
PPP1R3DO95685 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPP1R3DO95685 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.32■□□□□ 0.04
PPP1R3DO95685 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms