Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CLSTN1O94985 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.81■□□□□ 0.6
CLSTN1O94985 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.81■□□□□ 0.6
CLSTN1O94985 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.8■□□□□ 0.6
CLSTN1O94985 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 AL353593.2-201ENST00000602529 1483 ntBASIC18.8■□□□□ 0.6
CLSTN1O94985 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.8■□□□□ 0.6
CLSTN1O94985 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 AC132938.5-201ENST00000624980 1813 ntBASIC18.8■□□□□ 0.6
CLSTN1O94985 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.8■□□□□ 0.6
CLSTN1O94985 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.8■□□□□ 0.6
CLSTN1O94985 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.8■□□□□ 0.6
CLSTN1O94985 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.8■□□□□ 0.6
CLSTN1O94985 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.8■□□□□ 0.6
CLSTN1O94985 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.8■□□□□ 0.6
CLSTN1O94985 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.8■□□□□ 0.6
CLSTN1O94985 REXO1L6P-202ENST00000619970 1078 ntBASIC18.8■□□□□ 0.6
CLSTN1O94985 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.8■□□□□ 0.6
CLSTN1O94985 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.8■□□□□ 0.6
CLSTN1O94985 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLSTN1O94985 AL161772.1-201ENST00000610494 4412 ntBASIC18.8■□□□□ 0.6
CLSTN1O94985 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CLSTN1O94985 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLSTN1O94985 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLSTN1O94985 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.79■□□□□ 0.6
CLSTN1O94985 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CLSTN1O94985 AC004817.3-201ENST00000602957 2129 ntBASIC18.79■□□□□ 0.6
CLSTN1O94985 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLSTN1O94985 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.79■□□□□ 0.6
CLSTN1O94985 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 AL020989.1-201ENST00000422979 469 ntBASIC18.79■□□□□ 0.6
CLSTN1O94985 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.79■□□□□ 0.6
CLSTN1O94985 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CLSTN1O94985 SCARNA2-201ENST00000458748 420 ntBASIC18.79■□□□□ 0.6
CLSTN1O94985 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.79■□□□□ 0.6
CLSTN1O94985 STK25P1-201ENST00000585406 838 ntBASIC18.79■□□□□ 0.6
CLSTN1O94985 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.79■□□□□ 0.6
CLSTN1O94985 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 AP005117.1-201ENST00000584346 1413 ntBASIC18.79■□□□□ 0.6
CLSTN1O94985 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
CLSTN1O94985 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CLSTN1O94985 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLSTN1O94985 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.79■□□□□ 0.6
CLSTN1O94985 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLSTN1O94985 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLSTN1O94985 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms