Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.77□□□□□ -0.05
UPK1BO75841 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UPK1BO75841 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK1BO75841 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
UPK1BO75841 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.77□□□□□ -0.05
UPK1BO75841 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UPK1BO75841 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 AC067930.6-201ENST00000623257 4947 ntBASIC14.76□□□□□ -0.05
UPK1BO75841 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK1BO75841 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.76□□□□□ -0.05
UPK1BO75841 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UPK1BO75841 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 AC034268.1-201ENST00000441047 882 ntBASIC14.76□□□□□ -0.05
UPK1BO75841 AC026271.3-201ENST00000571884 352 ntBASIC14.76□□□□□ -0.05
UPK1BO75841 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.76□□□□□ -0.05
UPK1BO75841 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1BO75841 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1BO75841 LINC01101-201ENST00000622953 1884 ntBASIC14.76□□□□□ -0.05
UPK1BO75841 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
UPK1BO75841 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 CDC14C-201ENST00000428251 1719 ntBASIC14.75□□□□□ -0.05
UPK1BO75841 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1BO75841 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.75□□□□□ -0.05
UPK1BO75841 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
UPK1BO75841 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1BO75841 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1BO75841 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1BO75841 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1BO75841 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.75□□□□□ -0.05
UPK1BO75841 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1BO75841 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.75□□□□□ -0.05
UPK1BO75841 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.75□□□□□ -0.05
UPK1BO75841 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 AC005837.3-201ENST00000612163 286 ntBASIC14.75□□□□□ -0.05
UPK1BO75841 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.75□□□□□ -0.05
UPK1BO75841 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.75□□□□□ -0.05
UPK1BO75841 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.75□□□□□ -0.05
UPK1BO75841 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1BO75841 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UPK1BO75841 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
UPK1BO75841 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 LINC02447-202ENST00000501888 2146 ntBASIC14.75□□□□□ -0.05
UPK1BO75841 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UPK1BO75841 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.75□□□□□ -0.05
UPK1BO75841 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UPK1BO75841 AL137784.3-201ENST00000623858 2288 ntBASIC14.75□□□□□ -0.05
UPK1BO75841 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
UPK1BO75841 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms