Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.12■□□□□ 0.01
PFDN1O60925 KRT18P41-201ENST00000518924 1277 ntBASIC15.12■□□□□ 0.01
PFDN1O60925 MIR4466-201ENST00000606121 54 ntBASIC15.12■□□□□ 0.01
PFDN1O60925 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.12■□□□□ 0.01
PFDN1O60925 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PFDN1O60925 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 LINC00552-201ENST00000625151 2579 ntBASIC15.12■□□□□ 0.01
PFDN1O60925 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 HLA-A-202ENST00000376806 1854 ntBASIC15.12■□□□□ 0.01
PFDN1O60925 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PFDN1O60925 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PFDN1O60925 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PFDN1O60925 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PFDN1O60925 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.11■□□□□ 0.01
PFDN1O60925 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.11■□□□□ 0.01
PFDN1O60925 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PFDN1O60925 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 AL596087.1-201ENST00000400979 1969 ntBASIC15.11■□□□□ 0.01
PFDN1O60925 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.11■□□□□ 0.01
PFDN1O60925 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PFDN1O60925 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
PFDN1O60925 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.1■□□□□ 0.01
PFDN1O60925 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.1■□□□□ 0.01
PFDN1O60925 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PFDN1O60925 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PFDN1O60925 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PFDN1O60925 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 REXO1L11P-201ENST00000620964 1927 ntBASIC15.1■□□□□ 0.01
PFDN1O60925 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.1■□□□□ 0.01
PFDN1O60925 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.1■□□□□ 0.01
PFDN1O60925 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 AL591742.1-201ENST00000604433 565 ntBASIC15.1■□□□□ 0.01
PFDN1O60925 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.1■□□□□ 0.01
PFDN1O60925 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.1■□□□□ 0.01
PFDN1O60925 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms