Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXA2O43364 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXA2O43364 AC108860.2-201ENST00000562760 2183 ntBASIC17.99■□□□□ 0.47
HOXA2O43364 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HOXA2O43364 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HOXA2O43364 SERPINA7P1-201ENST00000443077 631 ntBASIC17.99■□□□□ 0.47
HOXA2O43364 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXA2O43364 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXA2O43364 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXA2O43364 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
HOXA2O43364 AC073592.8-201ENST00000624126 511 ntBASIC17.99■□□□□ 0.47
HOXA2O43364 AC008761.3-201ENST00000624803 892 ntBASIC17.99■□□□□ 0.47
HOXA2O43364 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXA2O43364 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 NOC2LP1-202ENST00000452600 2235 ntBASIC17.99■□□□□ 0.47
HOXA2O43364 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HOXA2O43364 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HOXA2O43364 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXA2O43364 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXA2O43364 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXA2O43364 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.98■□□□□ 0.47
HOXA2O43364 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXA2O43364 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HOXA2O43364 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXA2O43364 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HOXA2O43364 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.98■□□□□ 0.47
HOXA2O43364 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXA2O43364 PRYP6-201ENST00000514804 343 ntBASIC17.98■□□□□ 0.47
HOXA2O43364 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.98■□□□□ 0.47
HOXA2O43364 LINC02560-201ENST00000596379 459 ntBASIC17.98■□□□□ 0.47
HOXA2O43364 AC007967.4-201ENST00000614700 386 ntBASIC17.98■□□□□ 0.47
HOXA2O43364 AF228730.6-201ENST00000641497 218 ntBASIC17.98■□□□□ 0.47
HOXA2O43364 AC084121.3-201ENST00000641716 218 ntBASIC17.98■□□□□ 0.47
HOXA2O43364 AC105233.6-201ENST00000642093 218 ntBASIC17.98■□□□□ 0.47
HOXA2O43364 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.98■□□□□ 0.47
HOXA2O43364 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HOXA2O43364 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXA2O43364 LINC02012-201ENST00000608206 1725 ntBASIC17.98■□□□□ 0.47
HOXA2O43364 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.98■□□□□ 0.47
HOXA2O43364 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HOXA2O43364 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HOXA2O43364 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HOXA2O43364 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 AP3S2-216ENST00000617003 1561 ntBASIC17.97■□□□□ 0.47
HOXA2O43364 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXA2O43364 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HOXA2O43364 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.97■□□□□ 0.47
HOXA2O43364 HLA-H-201ENST00000383620 1096 ntBASIC17.97■□□□□ 0.47
HOXA2O43364 AC092580.3-201ENST00000430932 139 ntBASIC17.97■□□□□ 0.47
HOXA2O43364 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXA2O43364 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXA2O43364 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.97■□□□□ 0.47
HOXA2O43364 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.97■□□□□ 0.47
HOXA2O43364 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.97■□□□□ 0.47
HOXA2O43364 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXA2O43364 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXA2O43364 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HOXA2O43364 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HOXA2O43364 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.97■□□□□ 0.47
HOXA2O43364 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HOXA2O43364 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HOXA2O43364 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms