Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC006538.1-201ENST00000567905 1585 ntBASIC11.63□□□□□ -0.55
NDUFA1O15239 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.63□□□□□ -0.55
NDUFA1O15239 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 IGHGP-201ENST00000390555 1178 ntBASIC11.63□□□□□ -0.55
NDUFA1O15239 AL596275.1-201ENST00000423464 877 ntBASIC11.63□□□□□ -0.55
NDUFA1O15239 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 AL441883.1-201ENST00000566170 1045 ntBASIC11.63□□□□□ -0.55
NDUFA1O15239 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 GPR32P1-201ENST00000601788 811 ntBASIC11.63□□□□□ -0.55
NDUFA1O15239 AC079602.3-201ENST00000623931 403 ntBASIC11.63□□□□□ -0.55
NDUFA1O15239 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NDUFA1O15239 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 AL353692.3-201ENST00000407031 1396 ntBASIC11.63□□□□□ -0.55
NDUFA1O15239 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NDUFA1O15239 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.63□□□□□ -0.55
NDUFA1O15239 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.63□□□□□ -0.55
NDUFA1O15239 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
NDUFA1O15239 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NDUFA1O15239 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NDUFA1O15239 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
NDUFA1O15239 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.62□□□□□ -0.55
NDUFA1O15239 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
NDUFA1O15239 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
NDUFA1O15239 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC11.62□□□□□ -0.55
NDUFA1O15239 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
NDUFA1O15239 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.62□□□□□ -0.55
NDUFA1O15239 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
NDUFA1O15239 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
NDUFA1O15239 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.62□□□□□ -0.55
NDUFA1O15239 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
NDUFA1O15239 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.62□□□□□ -0.55
NDUFA1O15239 MYCLP1-201ENST00000372451 1075 ntBASIC11.62□□□□□ -0.55
NDUFA1O15239 AC113347.1-201ENST00000413321 391 ntBASIC11.62□□□□□ -0.55
NDUFA1O15239 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.62□□□□□ -0.55
NDUFA1O15239 SPDYE15P-201ENST00000424157 909 ntBASIC11.62□□□□□ -0.55
NDUFA1O15239 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.62□□□□□ -0.55
NDUFA1O15239 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 HOMER2P1-201ENST00000455653 964 ntBASIC11.62□□□□□ -0.55
NDUFA1O15239 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
NDUFA1O15239 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.62□□□□□ -0.55
NDUFA1O15239 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.62□□□□□ -0.55
NDUFA1O15239 NORAD-201ENST00000565493 5339 ntBASIC11.62□□□□□ -0.55
NDUFA1O15239 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.62□□□□□ -0.55
NDUFA1O15239 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
NDUFA1O15239 EGFEM1P-202ENST00000431685 1563 ntBASIC11.62□□□□□ -0.55
NDUFA1O15239 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.62□□□□□ -0.55
NDUFA1O15239 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms