Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 FAM201B-201ENST00000458407 597 ntBASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 STK19B-204ENST00000512515 211 ntBASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 AC141257.4-201ENST00000634557 245 ntBASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 AC136944.6-201ENST00000634818 245 ntBASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 AC002310.6-201ENST00000624451 1377 ntBASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 AL353593.2-201ENST00000602529 1483 ntBASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRDV1A0A1B0GX56 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 AC010491.1-201ENST00000563101 2797 ntBASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 MIR935-201ENST00000401179 91 ntBASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 FAM8A6P-201ENST00000407496 1135 ntBASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 ZNF444P1-201ENST00000559497 298 ntBASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 NAPSB-206ENST00000562112 1266 ntBASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 AL139011.1-202ENST00000642063 584 ntBASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRDV1A0A1B0GX56 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRDV1A0A1B0GX56 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms