Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 TUBB8P12-201ENST00000308911 1335 ntBASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 TUBB7P-202ENST00000428444 1305 ntBASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 TUBB8P7-204ENST00000567960 1332 ntBASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV18A0A075B6X5 AL135999.2-201ENST00000622438 1686 ntBASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV18A0A075B6X5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 MMP23A-201ENST00000234610 1017 ntBASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 AC006538.1-201ENST00000567905 1585 ntBASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 AL049757.1-201ENST00000616842 1596 ntBASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 MTHFR-217ENST00000641820 1569 ntBASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV18A0A075B6X5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms