Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 AC254562.1-201ENST00000417586 456 ntBASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 ACTG1P14-201ENST00000446382 1122 ntBASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CEND1P1-201ENST00000451006 455 ntBASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 ALG1L5P-201ENST00000482043 771 ntBASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 AL596442.2-201ENST00000610240 980 ntBASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.31□□□□□ -0.28
TSSC4Q9Y5U2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PMS2P2-201ENST00000425039 1128 ntBASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 AL078644.1-201ENST00000609881 752 ntBASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 ELL2P1-201ENST00000413990 1906 ntBASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 AC129492.6-201ENST00000611383 1305 ntBASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TSSC4Q9Y5U2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms