Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 MIR943-201ENST00000401286 94 ntBASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 AL355306.1-201ENST00000415580 579 ntBASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 FAM207CP-201ENST00000443486 507 ntBASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 AC069335.1-201ENST00000489972 472 ntBASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 IGHV3-52-201ENST00000519770 353 ntBASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 KRT18P55-202ENST00000578578 1546 ntBASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 AC009336.1-201ENST00000608941 1553 ntBASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SORCS3Q9UPU3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 SPDYE11-202ENST00000450699 704 ntBASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 AL512356.2-201ENST00000546955 174 ntBASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 SPDYE9P-201ENST00000570642 692 ntBASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 SPDYE10P-202ENST00000612005 668 ntBASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 SPDYE8P-202ENST00000612377 668 ntBASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 PHGDH-209ENST00000641074 1780 ntBASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SORCS3Q9UPU3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 AP001094.4-201ENST00000579008 2176 ntBASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 TUBB3P1-201ENST00000405796 1332 ntBASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 AL671277.1-201ENST00000429656 993 ntBASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 KLF2P3-201ENST00000451977 1087 ntBASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SORCS3Q9UPU3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms