Protein–RNA interactions for Protein: Q9UBR5

CKLF, Chemokine-like factor, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKLFQ9UBR5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKLFQ9UBR5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CKLFQ9UBR5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CKLFQ9UBR5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 AL365209.1-201ENST00000624418 6473 ntBASIC14.9□□□□□ -0.02
CKLFQ9UBR5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 AC117947.1-201ENST00000427448 529 ntBASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 AL138831.2-201ENST00000606564 490 ntBASIC14.9□□□□□ -0.02
CKLFQ9UBR5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CKLFQ9UBR5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 TERF1P1-201ENST00000311003 1181 ntBASIC14.89□□□□□ -0.03
CKLFQ9UBR5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 AL391005.1-201ENST00000623953 2435 ntBASIC14.89□□□□□ -0.03
CKLFQ9UBR5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CKLFQ9UBR5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms