Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 FAM86C2P-203ENST00000528684 1004 ntBASIC18.15■□□□□ 0.5
CNTN3Q9P232 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 AC022145.2-201ENST00000598203 171 ntBASIC18.15■□□□□ 0.5
CNTN3Q9P232 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 AC013467.2-201ENST00000605472 835 ntBASIC18.15■□□□□ 0.5
CNTN3Q9P232 AL161645.1-201ENST00000622716 1255 ntBASIC18.15■□□□□ 0.5
CNTN3Q9P232 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.15■□□□□ 0.5
CNTN3Q9P232 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNTN3Q9P232 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNTN3Q9P232 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.14■□□□□ 0.5
CNTN3Q9P232 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNTN3Q9P232 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNTN3Q9P232 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.14■□□□□ 0.5
CNTN3Q9P232 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 PMS2P4-201ENST00000412466 1052 ntBASIC18.14■□□□□ 0.49
CNTN3Q9P232 AL671277.1-201ENST00000429656 993 ntBASIC18.14■□□□□ 0.49
CNTN3Q9P232 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 RARRES2P8-201ENST00000566335 367 ntBASIC18.14■□□□□ 0.49
CNTN3Q9P232 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNTN3Q9P232 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNTN3Q9P232 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 AC004461.1-201ENST00000412461 403 ntBASIC18.13■□□□□ 0.49
CNTN3Q9P232 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 AC026120.1-201ENST00000611536 926 ntBASIC18.13■□□□□ 0.49
CNTN3Q9P232 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTN3Q9P232 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTN3Q9P232 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms