Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TREX1Q9NSU2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AC131009.4-201ENST00000624048 1740 ntBASIC16.85■□□□□ 0.29
TREX1Q9NSU2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AL450487.1-201ENST00000426799 995 ntBASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AL031008.1-201ENST00000619963 541 ntBASIC16.85■□□□□ 0.29
TREX1Q9NSU2 MIR1199-201ENST00000621445 119 ntBASIC16.85■□□□□ 0.29
TREX1Q9NSU2 FAM215A-202ENST00000632077 792 ntBASIC16.85■□□□□ 0.29
TREX1Q9NSU2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AL671710.1-201ENST00000610245 2349 ntBASIC16.85■□□□□ 0.29
TREX1Q9NSU2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TREX1Q9NSU2 AL512652.2-201ENST00000625156 1716 ntBASIC16.84■□□□□ 0.29
TREX1Q9NSU2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 AC004870.1-201ENST00000315132 882 ntBASIC16.84■□□□□ 0.29
TREX1Q9NSU2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 FAAHP1-202ENST00000446499 1238 ntBASIC16.84■□□□□ 0.29
TREX1Q9NSU2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 PGM5P2-202ENST00000637225 1043 ntBASIC16.84■□□□□ 0.29
TREX1Q9NSU2 AC129492.6-201ENST00000611383 1305 ntBASIC16.84■□□□□ 0.29
TREX1Q9NSU2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 AL353732.1-201ENST00000569618 1459 ntBASIC16.84■□□□□ 0.29
TREX1Q9NSU2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.84■□□□□ 0.29
TREX1Q9NSU2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms