Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 AC060834.1-201ENST00000443027 2032 ntBASIC20.29■□□□□ 0.84
SALL1Q9NSC2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 KRT18P32-201ENST00000424695 1287 ntBASIC20.28■□□□□ 0.84
SALL1Q9NSC2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 AP001059.3-201ENST00000619053 235 ntBASIC20.28■□□□□ 0.84
SALL1Q9NSC2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 AD000864.1-201ENST00000624076 2295 ntBASIC20.28■□□□□ 0.84
SALL1Q9NSC2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SALL1Q9NSC2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 TUBB8P12-201ENST00000308911 1335 ntBASIC20.27■□□□□ 0.84
SALL1Q9NSC2 TUBB7P-202ENST00000428444 1305 ntBASIC20.27■□□□□ 0.84
SALL1Q9NSC2 TUBB8P7-204ENST00000567960 1332 ntBASIC20.27■□□□□ 0.84
SALL1Q9NSC2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SALL1Q9NSC2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 AC008267.7-201ENST00000624570 1194 ntBASIC20.27■□□□□ 0.83
SALL1Q9NSC2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.27■□□□□ 0.83
SALL1Q9NSC2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms