Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 AC104076.2-201ENST00000448912 469 ntBASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB16Q9NRJ7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 VENTXP7-201ENST00000475503 772 ntBASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB16Q9NRJ7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms