Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 IGLL3P-201ENST00000412472 434 ntBASIC17.91■□□□□ 0.46
CYLDQ9NQC7 BX842568.4-201ENST00000421222 227 ntBASIC17.91■□□□□ 0.46
CYLDQ9NQC7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 SLC25A6P2-201ENST00000497974 877 ntBASIC17.91■□□□□ 0.46
CYLDQ9NQC7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 REXO1L3P-201ENST00000622202 1288 ntBASIC17.91■□□□□ 0.46
CYLDQ9NQC7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYLDQ9NQC7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CYLDQ9NQC7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.89■□□□□ 0.46
CYLDQ9NQC7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 KRT18P13-201ENST00000400056 1290 ntBASIC17.89■□□□□ 0.45
CYLDQ9NQC7 AC004832.2-201ENST00000426397 482 ntBASIC17.89■□□□□ 0.45
CYLDQ9NQC7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 AC092068.3-201ENST00000587894 2016 ntBASIC17.89■□□□□ 0.45
CYLDQ9NQC7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CYLDQ9NQC7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms