Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.62■□□□□ 0.73
VAT1LQ9HCJ6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 ALG1L5P-201ENST00000482043 771 ntBASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 AC092919.2-201ENST00000623631 1645 ntBASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 AC060834.1-201ENST00000443027 2032 ntBASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.61■□□□□ 0.73
VAT1LQ9HCJ6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 RPS8P6-201ENST00000426177 609 ntBASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 AC005829.1-201ENST00000570002 483 ntBASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VAT1LQ9HCJ6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 AL021920.2-201ENST00000624828 1351 ntBASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 AP001094.4-201ENST00000579008 2176 ntBASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VAT1LQ9HCJ6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 TOP3BP1-201ENST00000420768 1380 ntBASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
VAT1LQ9HCJ6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VAT1LQ9HCJ6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms