Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 AC125634.1-201ENST00000438758 1403 ntBASIC20.86■□□□□ 0.93
UPF2Q9HAU5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 AL645728.1-201ENST00000366221 2101 ntBASIC20.86■□□□□ 0.93
UPF2Q9HAU5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPF2Q9HAU5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 AC132872.4-202ENST00000622924 2756 ntBASIC20.85■□□□□ 0.93
UPF2Q9HAU5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPF2Q9HAU5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 HBZP1-201ENST00000354915 429 ntBASIC20.84■□□□□ 0.93
UPF2Q9HAU5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.84■□□□□ 0.93
UPF2Q9HAU5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UPF2Q9HAU5 AC011270.2-201ENST00000624293 2550 ntBASIC20.84■□□□□ 0.93
UPF2Q9HAU5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPF2Q9HAU5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.83■□□□□ 0.92
UPF2Q9HAU5 HYMAI-201ENST00000635591 3347 ntBASIC20.83■□□□□ 0.92
UPF2Q9HAU5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.82■□□□□ 0.92
UPF2Q9HAU5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms