Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.28□□□□□ -0.6
LITAFQ99732 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
LITAFQ99732 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.28□□□□□ -0.6
LITAFQ99732 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.28□□□□□ -0.6
LITAFQ99732 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
LITAFQ99732 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.28□□□□□ -0.6
LITAFQ99732 MIR5787-201ENST00000611784 55 ntBASIC11.28□□□□□ -0.6
LITAFQ99732 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
LITAFQ99732 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 CICP24-201ENST00000605464 2705 ntBASIC11.28□□□□□ -0.6
LITAFQ99732 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LITAFQ99732 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LITAFQ99732 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LITAFQ99732 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.27□□□□□ -0.6
LITAFQ99732 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LITAFQ99732 AC016027.1-202ENST00000607927 1699 ntBASIC11.27□□□□□ -0.6
LITAFQ99732 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LITAFQ99732 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LITAFQ99732 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LITAFQ99732 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.27□□□□□ -0.61
LITAFQ99732 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 SSR4P1-203ENST00000599569 2260 ntBASIC11.27□□□□□ -0.61
LITAFQ99732 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.27□□□□□ -0.61
LITAFQ99732 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.27□□□□□ -0.61
LITAFQ99732 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.27□□□□□ -0.61
LITAFQ99732 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LITAFQ99732 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC11.27□□□□□ -0.61
LITAFQ99732 MTCL1P1-201ENST00000446207 792 ntBASIC11.27□□□□□ -0.61
LITAFQ99732 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC11.27□□□□□ -0.61
LITAFQ99732 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.27□□□□□ -0.61
LITAFQ99732 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.27□□□□□ -0.61
LITAFQ99732 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LITAFQ99732 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LITAFQ99732 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.27□□□□□ -0.61
LITAFQ99732 AC026748.1-201ENST00000624349 3251 ntBASIC11.27□□□□□ -0.61
LITAFQ99732 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.27□□□□□ -0.61
LITAFQ99732 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LITAFQ99732 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LITAFQ99732 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LITAFQ99732 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms