Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF48Q96MX3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 AC108860.2-201ENST00000562760 2183 ntBASIC13.79□□□□□ -0.2
ZNF48Q96MX3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF48Q96MX3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 AC004835.2-201ENST00000603762 682 ntBASIC13.78□□□□□ -0.2
ZNF48Q96MX3 REXO1L3P-201ENST00000622202 1288 ntBASIC13.78□□□□□ -0.2
ZNF48Q96MX3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
ZNF48Q96MX3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF48Q96MX3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.77□□□□□ -0.2
ZNF48Q96MX3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF48Q96MX3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF48Q96MX3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms