Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 AP005117.1-202ENST00000581724 1908 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 KRT8P10-201ENST00000450021 1447 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 INGX-201ENST00000359239 846 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 MIR1238-201ENST00000408483 83 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 ECEL1P3-201ENST00000427961 737 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 STK19B-204ENST00000512515 211 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 GPR32P1-201ENST00000601788 811 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 AC023824.1-201ENST00000562945 2975 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.61□□□□□ -0.07
CMTM3Q96MX0 GGT4P-201ENST00000623672 1708 ntBASIC14.61□□□□□ -0.07
CMTM3Q96MX0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 FAM45BP-202ENST00000592932 1624 ntBASIC14.6□□□□□ -0.07
CMTM3Q96MX0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 FAM8A6P-201ENST00000407496 1135 ntBASIC14.6□□□□□ -0.07
CMTM3Q96MX0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 GCSHP2-201ENST00000560971 527 ntBASIC14.6□□□□□ -0.07
CMTM3Q96MX0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 TMEM191A-211ENST00000637163 1067 ntBASIC14.6□□□□□ -0.07
CMTM3Q96MX0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.6□□□□□ -0.07
CMTM3Q96MX0 AC006449.6-201ENST00000612330 2296 ntBASIC14.59□□□□□ -0.07
CMTM3Q96MX0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms