Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 AC004706.3-202ENST00000621574 984 ntBASIC17.93■□□□□ 0.46
TRIM11Q96F44 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 PAWRP1-201ENST00000451083 565 ntBASIC17.92■□□□□ 0.46
TRIM11Q96F44 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM11Q96F44 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM11Q96F44 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 AC006538.1-201ENST00000567905 1585 ntBASIC17.91■□□□□ 0.46
TRIM11Q96F44 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 AC006277.1-201ENST00000624348 1610 ntBASIC17.91■□□□□ 0.46
TRIM11Q96F44 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.91■□□□□ 0.46
TRIM11Q96F44 AC006557.2-201ENST00000592985 1240 ntBASIC17.91■□□□□ 0.46
TRIM11Q96F44 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM11Q96F44 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM11Q96F44 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 PCDHB19P-201ENST00000570871 2371 ntBASIC17.9■□□□□ 0.46
TRIM11Q96F44 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms