Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 AC131009.4-201ENST00000624048 1740 ntBASIC14.91□□□□□ -0.02
TMEM54Q969K7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM54Q969K7 HLA-A-202ENST00000376806 1854 ntBASIC14.91□□□□□ -0.02
TMEM54Q969K7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM54Q969K7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 FAM185BP-201ENST00000443595 716 ntBASIC14.9□□□□□ -0.02
TMEM54Q969K7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 MIR4751-201ENST00000578027 74 ntBASIC14.9□□□□□ -0.02
TMEM54Q969K7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.9□□□□□ -0.02
TMEM54Q969K7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM54Q969K7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 AC006538.1-201ENST00000567905 1585 ntBASIC14.9□□□□□ -0.02
TMEM54Q969K7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TMEM54Q969K7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 SNX33P1-201ENST00000592116 1762 ntBASIC14.89□□□□□ -0.03
TMEM54Q969K7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 HCG4-201ENST00000418983 998 ntBASIC14.89□□□□□ -0.03
TMEM54Q969K7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 VN2R19P-201ENST00000442399 1052 ntBASIC14.89□□□□□ -0.03
TMEM54Q969K7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM54Q969K7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM54Q969K7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM54Q969K7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms