Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AL512604.3-201ENST00000569583 964 ntBASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 MIR4785-201ENST00000585005 73 ntBASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNIH3Q8TBE1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 AL603832.2-201ENST00000566195 2125 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 TUBB7P-202ENST00000428444 1305 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 AL135999.2-201ENST00000622438 1686 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 AC128688.1-201ENST00000487626 519 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 AC034232.1-201ENST00000506026 1064 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 GCSHP2-201ENST00000560971 527 ntBASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNIH3Q8TBE1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CNIH3Q8TBE1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNIH3Q8TBE1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms